Ll_transcript_501842

• Id Trinity: TRINITY_DN47363_c0_g1_i18
• Name Transcript: Ll_transcript_501842
• Sequence: CTCTCTTCTCCTCCGATCGGTCCAGTTGACTTTTATGGCTACGATCGGACATAACAATCTCAATGCCAAATTGGTCTTTTTACTTTCCGATCCCTCTTTC CTTTTCTTCGATTCCTGTTTAGACTTATCATAACCTAATTATTTCATTTTCTTCTTCTCTAAATTTCAGGTTCTCCTTGGGGATATGGGTGCTGGAAAAT CCAGCCTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTCCAGGTTCTTTCACTCTCGAATCCTGTGATTACTTCTGTTTATTTCTCCTATTGTCA AATTCGTAATCCATAATTCTCCCCTAATATTCGGTGAATTACTTTGTTGCGTTTTCAATTGATGAAAATTTATATAGTTTTAAAATAAAGAAAATTGGAA GATGAGATAGGGAATAGTTGGTTTTAACTTTTTATACTTTGATGCTATTGAGCGAATCAAGCTATCTTGTTTCTAATAAATGCTTCTAAAACCTATGAAT TTGATTGTGAATATGGGATATTTTTAGTGAGACTAAATTGTTAACTTTAAAATGGGTAAATCCTTAAGTAATCTCAAGGGTTATTTATACTCTTAAAGGA CTACATTTGATTAAAATTTTCGCGACTTTGTTTGGGTCGATGTAAATTTAATCCAAGAGCATGCATGATTATGAAGTTCATGTGTCATGTTTTTAGTGGA CTGAGCATACCACTCTGATATATTACATGAGAATTTTTTCCTTAAAATGAGGAGTTGCTTTTCTGATTTGCCAAACATTCATTGAGTTCTGGTTTTACAC TAAATGCTTTGTTGACCAAATACAATAAAAATGAATAACATGTGTAACAGTTCACCTTGTATCTTGGTCCCATGGAACAAGTTAGGCATCAGAGTGATTA TCCTTAAAAGTATACTCCGGCAGGGAAAAAGAAGGCTGGGTCGGGTGGAAGATATATATAGAGAGAATTGCCTCTGTTTATGGTCCTCTGCAAGTAGATG TTTTTGTTCTCACAGGCTTTTATTTTATGCCAAAGCCATAAATAGAGATGTGGAGATTATGTTGCTGAATTTATTTGGTCTATTGTGGTGACAGGAATCG ACAATAGGGGCAGCATTCTTTTCACAGACATTGGCTGTAAATGATGCCACAGTGAAATTCGAGATTTGGGACACAGCTGGACAAGAAAGATACCATAGCT TGGCTCCCATGTACTACAGAGGCGCAGCTGCTGCTATCATTGTCTATGACATTACTAATTCGGATTCATTTACACGAGCTAAGAAGTGGGTCCAGGAACT TCAGAAGCAAGGGAACCCTAACATGGTTGTGGCTCTTGCTGGTAACAAAGCCGACCTGGAAGATAAGAGGAAAGTGACAGCTGAAGAAGCACGTGCATAC GCTGAGGAAAATGGCCTGTTTTTCATGGAGACCTCTGCCAAAACTGCAGCCAATGTTAATGATGTATTTCATGAAATAGGTGTGACACCATTCCTTGCAT ATACTTTAGGGGATGCTTGATGACAAGCATTCGTAGTGCCTTTTTTTTTTAATGTTATTCATCTCTTTAATTGAATAGCATTAGAAACAAATAAAATAAA TTAGAATGTTAGTCCATTCAGTCCAAAGAGGAGGAGGGGGATGGGAACTCTCTTTTAGAGGAAATATTTGTCCCTGCTTTGCAGACCTATATATTGACCA CTGATAATAAACTGTGAAATATTGTGAGAACCAAATGAAATTGTTTTTCCTAATATTTTTCTCTACACAAAGTTGAAGAAGGTATGAATGAATTGGCCAT AGCCCATAGAACATTCTTGAGAAAACGGCTCAGATGGTGAATTGTTAGGGGTGTAACATGCTGGAGTGAATTCTAGTTGTAAACCTTTATTTAGAAATAC AGGATATTTTTTTTTGGTTTTACAATAGCAGAACGGACTGTCTAGTAAAAACAAGATAAAGAGCAATTTGCTGATTTGCTCTGTTTTAATGGCTATATTA TCTTGCATGTCATAGAATTCTCTTTCTTTTGTCTACTTAATACTTTAGTAGACTTGGCTTGACTTACAATTGGTTATGTACACAGCGAAGAGGTTGCCCA GGGCCCAACCAGCACAAAAACCAGCAGGGATGGTTCTTGTTGACAG
• Tissue: pods
• Gene name: LI_gene_152004;
• Additional information: details;

Expression of Ll_transcript_501842

FPKM

• PAB: 6
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501842

• Blastp: Ras-related protein RHN1 from Nicotiana with 90% of identity
• Blastx: Ras-related protein RHN1 from Nicotiana with 91.47% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460953.1)
• Pfam: Ras family (PF00071.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;