Ll_transcript_501848

• Id Trinity: TRINITY_DN47363_c0_g1_i24
• Name Transcript: Ll_transcript_501848
• Sequence: GTCAACAATAGACTTGGACAACAAATCACTAGCAACTTACTTGTACCGAAAGAAAACATTGCCTTTATCAGGACTTTATGTTCTTAAAAGAACAATATAA TAATGTTTTATGTAAAAAGAAAAGAAATAATTAAATTAAGAAGCGCATATACACGCAATCACCAACCACAATTGAAATAACTATTTGCTTTCGCTTCTTC TTCTTCATTCTCTTGTTCCCTTTCTCTGTTTTATTACAATCTCCTCTGTTCTTCTGGAAGCTTCTATCTTTTCCGTTCGTTTTTGTCAACCCTCTCTTCT CCTCCGATCGGTCCAGTTGACTTTTATGGCTACGATCGGACATAACAATCTCAATGCCAAATTGGTTCTCCTTGGGGATATGGGTGCTGGAAAATCCAGC CTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTCCAGGTTCTTTCACTCTCGAATCCTGTGATTACTTCTGTTTATTTCTCCTATTGTCAAATTC GTAATCCATAATTCTCCCCTAATATTCGGTGAATTACTTTGTTGCGTTTTCAATTGATGAAAATTTATATAGTTTTAAAATAAAGAAAATTGGAAGATGA GATAGGGAATAGTTGGTTTTAACTTTTTATACTTTGATGCTATTGAGCGAATCAAGCTATCTTGTTTCTAATAAATGCTTCTAAAACCTATGAATTTGAT TGTGAATATGGGATATTTTTAGTGAGACTAAATTGTTAACTTTAAAATGGGTAAATCCTTAAGTAATCTCAAGGGTTATTTATACTCTTAAAGGACTACA TTTGATTAAAATTTTCGCGACTTTGTTTGGGTCGATGTAAATTTAATCCAAGAGCATGCATGATTATGAAGTTCATGTGTCATGTTTTTAGTGGACTGAG CATACCACTCTGATATATTACATGAGAATTTTTTCCTTAAAATGAGGAGTTGCTTTTCTGATTTGCCAAACATTCATTGAGTTCTGGTTTTACACTAAAT GCTTTGTTGACCAAATACAATAAAAATGAATAACATGTGTAACAGTTCACCTTGTATCTTGGTCCCATGGAACAAGTTAGGCATCAGAGTGATTATCCTT AAAAGTATACTCCGGCAGGGAAAAAGAAGGCTGGGTCGGGTGGAAGATATATATAGAGAGAATTGCCTCTGTTTATGGTCCTCTGCAAGTAGATGTTTTT GTTCTCACAGGCTTTTATTTTATGCCAAAGCCATAAATAGAGATGTGGAGATTATGTTGCTGAATTTATTTGGTCTATTGTGGTGACAGGAATCGACAAT AGGGGCAGCATTCTTTTCACAGACATTGGCTGTAAATGATGCCACAGTGAAATTCGAGATTTGGGACACAGCTGGACAAGAAAGATACCATAGCTTGGCT CCCATGTACTACAGAGGCGCAGCTGCTGCTATCATTGTCTATGACATTACTAATTCGGTGTGATTTCTTTTCCTTTGAATATTTCTAGGTACCTAGTTAA TACATGAATGATGTATGATATACTGGAAATTAGCAAACTCTCTATATTTGTAAGTTGTGTTTGTATGTTGGAACATTCAACCATTGTTGGTGTAAAATGT TATAGACGAAGAAGAGAAGAAAATCTACTGGCAGGGTTCTTTCTTTTAGATAGTATATTCCTATCCATTTGTCATTCTGTATGGCAAAGACTTGCTTTTA ATGTTAATTATTTATTATTTATGCTTACTTAGGTTTTACATGCTTGCTTCTGTATTTTATTCACAGGATTCATTTACACGAGCTAAGAAGTGGGTCCAGG AACTTCAGAAGCAAGGGAACCCTAACATGGTTGTGGCTCTTGCTGGTAACAAAGCCGACCTGGAAGATAAGAGGAAAGTGACAGCTGAAGAAGCACGTGC ATACGCTGAGGAAAATGGCCTGTTTTTCATGGAGACCTCTGCCAAAACTGCAGCCAATGTTAATGATGTATTTCATGAAATAGCGAAGAGGTTGCCCAGG GCCCAACCAGCACAAAAACCAGCAGGGATGGTTCTTGTTGACAGACCCGCTGATGGAGCCAGAGCTGCATCATGTTGTTCATAATTATTTATTCTATGTA GCCCCCTCTCTCTCATTTATGCACCCTTTTTCTAATGGTTAGTATAATTGTATCACTCTATGTACTGCACACTTTTGATAAACCTGTTATGTGGAACTCC ATCAAGTTCATGGGCTGCCTTCATCATTAATGCAAATTATAAAATAGAACTTGTGTTTGTAAAATATATATGTATCTCTCTTGGATTTGGTTCATAGCAC CATATAAACTACATCATATGATCAATAATCAATAATAACCACTCTTAATTTAAC
• Tissue: pods
• Gene name: LI_gene_152004;
• Additional information: details;

Expression of Ll_transcript_501848

FPKM

• PAB: 30.6
• PNAB: 1.9
• PS1: 2.5
• PS2: 2.8
• PS3: 4.2
• PW1: 5.9
• PW2: 5.7
• PW3: 6.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501848

• Blastp: Ras-related protein RHN1 from Nicotiana with 73.85% of identity
• Blastx: Ras-related protein RHN1 from Nicotiana with 73.85% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003553043.1)
• Pfam: Ras family (PF00071.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;