Id Trinity | TRINITY_DN47363_c0_g1_i26 |
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Name Transcript | Ll_transcript_501850 |
Sequence | CTCTCTTCTCCTCCGATCGGTCCAGTTGACTTTTATGGCTACGATCGGACATAACAATCTCAATGCCAAATTGGTCTTTTTACTTTCCGATCCCTCTTTC CTTTTCTTCGATTCCTGTTTAGACTTATCATAACCTAATTATTTCATTTTCTTCTTCTCTAAATTTCAGGTTCTCCTTGGGGATATGGGTGCTGGAAAAT CCAGCCTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTCCAGGTTCTTTCACTCTCGAATCCTGTGATTACTTCTGTTTATTTCTCCTATTGTCA AATTCGTAATCCATAATTCTCCCCTAATATTCGGTGAATTACTTTGTTGCGTTTTCAATTGATGAAAATTTATATAGTTTTAAAATAAAGAAAATTGGAA GATGAGATAGGGAATAGTTGGTTTTAACTTTTTATACTTTGATGCTATTGAGCGAATCAAGCTATCTTGTTTCTAATAAATGCTTCTAAAACCTATGAAT TTGATTGTGAATATGGGATATTTTTAGTGAGACTAAATTGTTAACTTTAAAATGGGTAAATCCTTAAGTAATCTCAAGGGTTATTTATACTCTTAAAGGA CTACATTTGATTAAAATTTTCGCGACTTTGTTTGGGTCGATGTAAATTTAATCCAAGAGCATGCATGATTATGAAGTTCATGTGTCATGTTTTTAGTGGA CTGAGCATACCACTCTGATATATTACATGAGAATTTTTTCCTTAAAATGAGGAGTTGCTTTTCTGATTTGCCAAACATTCATTGAGTTCTGGTTTTACAC TAAATGCTTTGTTGACCAAATACAATAAAAATGAATAACATGTGTAACAGTTCACCTTGTATCTTGGTCCCATGGAACAAGTTAGGCATCAGAGTGATTA TCCTTAAAAGTATACTCCGGCAGGGAAAAAGAAGGCTGGGTCGGGTGGAAGATATATATAGAGAGAATTGCCTCTGTTTATGGTCCTCTGCAAGTAGATG TTTTTGTTCTCACAGGCTTTTATTTTATGCCAAAGCCATAAATAGAGATGTGGAGATTATGTTGCTGAATTTATTTGGTCTATTGTGGTGACAGGAATCG ACAATAGGGGCAGCATTCTTTTCACAGACATTGGCTGTAAATGATGCCACAGTGAAATTCGAGATTTGGGACACAGCTGGACAAGAAAGATACCATAGCT TGGCTCCCATGTACTACAGAGGCGCAGCTGCTGCTATCATTGTCTATGACATTACTAATTCGGTGTGATTTCTTTTCCTTTGAATATTTCTAGGTACCTA GTTAATACATGAATGATGTATGATATACTGGAAATTAGCAAACTCTCTATATTTGTAAGTTGTGTTTGTATGTTGGAACATTCAACCATTGTTGGTGTAA AATGTTATAGACGAAGAAGAGAAGAAAATCTACTGGCAGGGTTCTTTCTTTTAGATAGTATATTCCTATCCATTTGTCATTCTGTATGGCAAAGACTTGC TTTTAATGTTAATTATTTATTATTTATGCTTACTTAGGTTTTACATGCTTGCTTCTGTATTTTATTCACAGGATTCATTTACACGAGCTAAGAAGTGGGT CCAGGAACTTCAGAAGCAAGGGAACCCTAACATGGTTGTGGCTCTTGCTGGTAACAAAGCCGACCTGGAAGATAAGAGGAAAGTGACAGCTGAAGAAGCA CGTGCATACGCTGAGGAAAATGGCCTGTTTTTCATGGAGACCTCTGCCAAAACTGCAGCCAATGTTAATGATGTATTTCATGAAATAGGTGAGGCCATTC CTTAATTGAATCACATTAGGTAATAGGTTAAGCAAATAAACTAAAATAGAATATCAGTCGTTGCATTCCAAGGAGGAGGACTGGGAGCCGAGGGAAACTC TTTTATAGGAAACATCTGTCCCTGCTTTGCAAACCAAAATATTTCCATTATATTCACCACTGATTAAATAAACTGAAATTTTGCTAGACTCAAATGTGTT TGTTTTTCCTAATATATATCTCTGCACACAAAGTTGATGAAGGTTATGAATGAATTTGGACATAAAACATTCATGAGTAAACGGCTCAGATATTAGCTGT TAAGGGTGCAACATGTTGTAGTGAGTTCTTGTTGTAAACCTTTTCTTAGAAATACAGGGACATTTTTTTGTAGGTTTTACAATAGAATAAAGGACTGTCT AGTAAAAACAAGATTAGAGTAATTTACTATTTTTATGGCTATAGTATCTTTCATGTGCTTCAGAATTGTTCCTTTTATGTACTTTGTATACATTGTCTGA CTAACAATTGATTTTGTCTACAGCCAAGAGGTTACCAAGAGCTCAGCCAGCACAAAACCCGGCAGGGATGGTTCTTGTTGACAGACCGGCCGAAGGAGCC AGAGCTTCTGCATCATGTTGCTCATAATTATCTATTCTGTATACCTATATCTCCCACCCTTAACTTATGCACCCTTTTCCTCTGTTTCCATGTACTGCAC ACTTTTGATATCCCTGTTATGTGGAGCTCCAACAAGTTCATGGGCTTCCTAGAATACTGATGCAAATTATAAAATAGAACTTGTGTTTGTAAAATATATA TGTATCTCTCTTGGATTTGGTTCATAGCACCATATAAACTACATCATATGATCAATAATCAATAATAACCACTCTTAATTTAAC BLAST |
Tissue | pods |
Gene name | LI_gene_152004; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501850
Blastp | Ras-related protein RHN1 from Nicotiana with 68.63% of identity |
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Blastx | Ras-related protein RHN1 from Nicotiana with 68.63% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (NP_001242153.1) |
Pfam | Ras family (PF00071.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |