| Id Trinity | TRINITY_DN47363_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_501833 |
| Sequence | CTCTCTTCTCCTCCGATCGGTCCAGTTGACTTTTATGGCTACGATCGGACATAACAATCTCAATGCCAAATTGGTCTTTTTACTTTCCGATCCCTCTTTC CTTTTCTTCGATTCCTGTTTAGACTTATCATAACCTAATTATTTCATTTTCTTCTTCTCTAAATTTCAGGTTCTCCTTGGGGATATGGGTGCTGGAAAAT CCAGCCTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTCCAGGTTCTTTCACTCTCGAATCCTGTGATTACTTCTGTTTATTTCTCCTATTGTCA AATTCGTAATCCATAATTCTCCCCTAATATTCGGTGAATTACTTTGTTGCGTTTTCAATTGATGAAAATTTATATAGTTTTAAAATAAAGAAAATTGGAA GATGAGATAGGGAATAGTTGGTTTTAACTTTTTATACTTTGATGCTATTGAGCGAATCAAGCTATCTTGTTTCTAATAAATGCTTCTAAAACCTATGAAT TTGATTGTGAATATGGGATATTTTTAGTGAGACTAAATTGTTAACTTTAAAATGGGTAAATCCTTAAGTAATCTCAAGGGTTATTTATACTCTTAAAGGA CTACATTTGATTAAAATTTTCGCGACTTTGTTTGGGTCGATGTAAATTTAATCCAAGAGCATGCATGATTATGAAGTTCATGTGTCATGTTTTTAGTGGA CTGAGCATACCACTCTGATATATTACATGAGAATTTTTTCCTTAAAATGAGGAGTTGCTTTTCTGATTTGCCAAACATTCATTGAGTTCTGGTTTTACAC TAAATGCTTTGTTGACCAAATACAATAAAAATGAATAACATGTGTAACAGTTCACCTTGTATCTTGGTCCCATGGAACAAGTTAGGCATCAGAGTGATTA TCCTTAAAAGTATACTCCGGCAGGGAAAAAGAAGGCTGGGTCGGGTGGAAGATATATATAGAGAGAATTGCCTCTGTTTATGGTCCTCTGCAAGTAGATG TTTTTGTTCTCACAGGCTTTTATTTTATGCCAAAGCCATAAATAGAGATGTGGAGATTATGTTGCTGAATTTATTTGGTCTATTGTGGTGACAGGAATCG ACAATAGGGGCAGCATTCTTTTCACAGACATTGGCTGTAAATGATGCCACAGTGAAATTCGAGATTTGGGACACAGCTGGACAAGAAAGATACCATAGCT TGGCTCCCATGTACTACAGAGGCGCAGCTGCTGCTATCATTGTCTATGACATTACTAATTCGGTGTGATTTCTTTTCCTTTGAATATTTCTAGGTACCTA GTTAATACATGAATGATGTATGATATACTGGAAATTAGCAAACTCTCTATATTTGTAAGTTGTGTTTGTATGTTGGAACATTCAACCATTGTTGGTGTAA AATGTTATAGACGAAGAAGAGAAGAAAATCTACTGGCAGGGTTCTTTCTTTTAGATAGTATATTCCTATCCATTTGTCATTCTGTATGGCAAAGACTTGC TTTTAATGTTAATTATTTATTATTTATGCTTACTTAGGTTTTACATGCTTGCTTCTGTATTTTATTCACAGGATTCATTTACACGAGCTAAGAAGTGGGT CCAGGAACTTCAGAAGCAAGGGAACCCTAACATGGTTGTGGCTCTTGCTGGTAACAAAGCCGACCTGGAAGATAAGAGGAAAGTGACAGCTGAAGAAGCA CGTGCATACGCTGAGGAAAATGGCCTGTTTTTCATGGAGACCTCTGCCAAAACTGCAGCCAATGTTAATGATGTATTTCATGAAATAGGTGTGACACCAT TCCTTGCATATACTTTAGGGGATGCTTGATGACAAGCATTCGTAGTGCCTTTTTTTTTTAATGTTATTCATCTCTTTAATTGAATAGCATTAGAAACAAA TAAAATAAATTAGAATGTTAGTCCATTCAGTCCAAAGAGGAGGAGGGGGATGGGAACTCTCTTTTAGAGGAAATATTTGTCCCTGCTTTGCAGACCTATA TATTGACCACTGATAATAAACTGTGAAATATTGTGAGAACCAAATGAAATTGTTTTTCCTAATATTTTTCTCTACACAAAGTTGAAGAAGGTATGAATGA ATTGGCCATAGCCCATAGAACATTCTTGAGAAAACGGCTCAGATGGTGAATTGTTAGGGGTGTAACATGCTGGAGTGAATTCTAGTTGTAAACCTTTATT TAGAAATACAGGATATTTTTTTTTGGTTTTACAATAGCAGAACGGACTGTCTAGTAAAAACAAGATAAAGAGCAATTTGCTGATTTGCTCTGTTTTAATG GCTATATTATCTTGCATGTCATAGAATTCTCTTTCTTTTGTCTACTTAATACTTTAGTAGACTTGGCTTGACTTACAATTGGTTATGTACACAGCGAAGA GGTTGCCCAGGGCCCAACCAGCACAAAAACCAGCAGGGATGGTTCTTGTTGACAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_152004; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501833
| Blastp | Ras-related protein RHN1 from Nicotiana with 71.13% of identity |
|---|---|
| Blastx | Ras-related protein Rab5 from Nicotiana with 71.13% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003553043.1) |
| Pfam | Ras family (PF00071.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |