Ll_transcript_499667

• Id Trinity: TRINITY_DN47364_c2_g1_i1
• Name Transcript: Ll_transcript_499667
• Sequence: TGCTGTTGCTGTGGTGGTTGGAAGTTGGGTGAGTCCCATTGGTGAAGCAAAGTTGAAGAGTCTTGCACTTGCACTTGAGGCTTCAAACAGGCCTTTCCTC TGGGTATTAAGGGCCACTTGGCTCCCACTTTTACCCACAGGCTTTTTGGAAAGAGTTTTCAACCAAGGTATAGGTATAGGTATAGTTGTTTCTTGGGCCC CACAAATTGAAATTTTGCAACATCACTCAGTGGGTTGTTATATCACACACTGTGGTTGGAATTCCACACTTGAAGCCTTACAATTCCAGAAGAGGCTTCT ATGCTACCCTGTTGCTGGAGACCAGTTTCTGAACTGTGCTTATATTGTTCAAGTTTGGAGGGTTGGTTTAAAACTTAATGGGCTTGGACATAAGGATGTT GAAGATGGGCTTGCTAGGGTGATGGCAGATAAAGAGATGGATAACCGATTAATTCAATTAAGTGAAAAAATCATGGGAATGCAAGATGATGATGAGAAGG GGAGTTTCATGTTGAAAGCATTTGTTGAATATCTCAATAAAGCATCATCTACAAGCATTCATGAAAATTGAAAATGCTACCTAGTTCGACCCAATTCACC ACTTTTTCAATATGTTCATAGCCCATAGGAGGATTACTCTTCTTTGTCTTAGACCCAACGTCATTAATAAAAAAAAGTCATTTTTACATTTCTACATTAC ATCAAGTTTCAAGGACCATCCACAATATCATATTTGATGTTTATGATATAAATAAATAAGTTTTATCATATTTGATGTTTATGAAAAAATAAGTTAGGAA ATAAAAAGCTGTCAACCGATAGTGTAGCCCATTGGTCTGGGCCAGGTCCAGTCCCTAACTTGTTAAATCAAATTAATTAAATTATAGAAAAGAAAGAAGA GAGAGAAAGGGAGCGGTGTTGAATTGAAAGGGAAAATTAGGGTGTTTCATCCATTCATCCGACCATCGTGTAGTGAGCAAAGGAGAAGAAAGAAGGGATG GGGGTGAAACAAGTGATTAAGAACCTGGACGCTTTTCCCCGCGCAGAAGATCACTTGTTACAGAAAACTCAATCTGGCGCTCTTGTTTCTGTGATTGGTA TAATCATAATGACCACATTGTTTATCCACGAGCTCTCTTTTTACCTTACAATTCACACTGTCCATCAGATGTCAGTGGACTTAACTCGTGGAGAGACTCT TCCTATTCACATAAACATGTCTTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTCGATGCCATTGATATGTCGGGCAAACATGAGGTCGATCTTGACACT AACATTTGGAAACTTCGCCTCAACAGTCATGGCCATATAATTGGCACTGAATATATATCCGACCTTGTTGAAAAAGAACATGCTGCTCATAAGCATGATG GTGGTAAAGATCACCATGAGGATTCAGAACAGAAGATTCATTTACAAACTTTTGACGAGTCTACAGAAAAAATGATCAAGAAGGTTAAGCAAGCATTAAC TGATGGAGAAGGATGCCGGGTTTATGGAGTTTTAAATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTTCACGGACTTAATATACAGGTTGCTCAG ATGATTTTTGGAGGATCGAATAACGTGAATGTCAGTCATGTTATCCATGATTTGTCATTTGGCCCCAAATATCCAGGACTTCACAATCCACTTGATGAGA CAACAAGGGTTTTACATGATACTAGTGGAACATTTAAATATTATATTAAGATTGTTCCCACTGAGTACCGATACATCTCAAAAGAAGTTTTACCAACTAA TCAGTTCTCAGTTACAGAATATTATTCACCCTTGAATGAGTTTGATCGGATATGGCCAGCTGTCTACTTTTTGTATGATCTGTCACCTATTACTGTCACA ATCAAAGAAGAGCGGCGTAGTTTTCTTCATTTCATTACTCGGCTTTGTGCAGTGCTGGGCGGAACCTTTGCTTTAACAGG
• Tissue: pods
• Gene name: LI_gene_152009;
• Additional information: details;

Expression of Ll_transcript_499667

FPKM

• PAB: 8.3
• PNAB: 10
• PS1: 12.6
• PS2: 8.5
• PS3: 12.1
• PW1: 10
• PW2: 12.3
• PW3: 14

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_499667

• Blastp: Endoplasmic reticulum-Golgi intermediate compartment protein 3 from Danio with 34.89% of identity
• Blastx: Endoplasmic reticulum-Golgi intermediate compartment protein 3 from Xenopus with 35.1% of identity
• Eggnog: Endoplasmic reticulumgolgi intermediate compartment protein(ENOG410XP7X)
• Kegg: Link to kegg annotations (393990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417788.1)
• Pfam: Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) (PF13850.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;