Ll_transcript_500050

• Id Trinity: TRINITY_DN47370_c0_g1_i2
• Name Transcript: Ll_transcript_500050
• Sequence: CTGCTTTCAACATGCTAAATGAGAATGCCCGCACAAGATAACTTACCATGCAAGCAACTAGGGTCACTATTCCTTTCATCAATGTCTCATGCCCTAAAAT GAAATGAATCATAATTGGGTATGAGAGATAAAAAAGACCTGGTATGAAAGCTATGATCTTTTCCCATTTTTTTAGTAATTGAATAAGTGATTTTATCAAT GGTTTTTACAGTTTCTCTGCACTTAGTTTTCCTTTGTTGCAATGTCTGGTATTCAATTGATTCAATGGGGTGTTAAGTTCATAGGTTTAATGAATAGTGC ATAATTGGATTTGTTTTTGTTGAAAGTGGACATTTTTTTAATACTGAGATCTCATTGTGTAATTTCAAGTGTTGAGAGATATAATAGTTTTACTCTGAAG TAGTGAATTTATAAGTGGTGGGATCTATTCATTGGGAGCACAATGGATTTGAATTTGAAGAGTTTGTTTGGCAGATTTCAGGAGCAGTTTGGTCCTGGTC CTGGTTTAGGTCCTGGATCTGGGACATGTCTCATGAAAGTTAATGGCATTGAGCCTAATTTTATAAGATCTTTATACAAAGCTTCTGCGGCTCTATATCG AACTGAGCCATGGATAAGATTGCGTCTGGGGCACTATTTTGGTGTCCGGGTTGGGAAGGATTCAGATTGGTCTGGGAAGAAACAGCCTTTCCCTTGTGTC CAGTTCATTGGAGGGGATGAAGGGGATGTTGGGTTCTACATGTTCAGATCAGAAAACGATGCGAAAATTTTGACAGGGCCTAGAGAAACCATTCATGTTC CGAGCGTTGAGCTTCTGAGAGTTACATATGAAGTGTAGTCTTTGATGTTCCCTTCTAATCGCAAAATGATCAAAACATTGTCACTGGAAACATCAGGGAC CAATCGATTTCCTGTCATTGATGTTACTCGCTGCATGCCTGGCGGTTATCTTTGATTTAGAAATCCGACATTTGAAGAGCTTAGGTTTGTCTATGCATTC ATGAAAGCCATTTCTATGGTGCACCTCTTACTTCATCAGGTAGACAAGGAAGGTGGTCCAAAGTTTTCAACAATGGCGTCTTTTGAACCTTTCATTGAGA CAGTTCATGTTCAGTGGTCTCCAGAAGTTGCAAAGACAGGTTATAATCTTGTTGTTGTTACTATGTCACACCCACCGGGTCAGGCATACGAAGAAATAGG TAATATGAGCATTGTCTCAACCCCAACCAATTATAGAGAGCCACCTAGGGATGGCACTTTTAATGAAACAAAAGCATACTCAAGTGCTGCTGGCTTGAGA CAGTGTGCAATGTGTGATAAAGAAGTACATGGAGAACACTCACTTTGTTGCGGCCAATGTAGGGCAGTCATTTACTGCAGCTCATTGTTCTAGAAGCAAC ACTGGAATGACACGCATAAAAGCATGTGCGGACTTTACAAGGCCATGATGGAAAGAGAAGAGGAGCTGGCTATAAAAGTTTTCATGTTCCCTTGTTCTGC TGACCAGCCTTGTAAGTGGCTTGAATCATTAAGTATCCACCAGAAGGGTATGTGGAGGAGAAAGTGCAGTTGCTATTCACACTGCCCTTTCGGTCTCCTT CCGGTGAAAGGTGGGCTGCAGGAACTGTGGGGTAGACTTGATGAGTTTGAATATCCTCACGACTCTCCTTTCCACAACGATTATGTCTCAAGCCCGTTTC TTCTCTCCGGTTGGTCAGAGTACTACAACCTTCGCTCGATTCCATTTGCAAGTCCTGTCGCAGACATTCTCTCGCATCCATTGACCGTGTATCACATACT AACTACTCTTAATATAAGTTCAAAGAAACTTATACTGAAAGGCAAGGATGTGATTGTTCACTACCTTGGACCTGAAGGGGAGTTGGATTGGATGTCAGCA TTTGCAGAAGTAAGCCACTTACTTAATGGATTGGGCAATGTACACATAGTGATGGTGGGACCGGAAGTGCCAACGAATTTGTCAGACACAACTTCAGGAA TGGGTAGCAGAGTGAGAGTGAATCTTGTGAGGGGGGTTTATCAGGTGGAAGCCTCCTACTTACCTACTCCACATGTTGTCATAGCTCTAAACTCTAGATT AGAAAGGTATTCGAGTTGGGGTGGAGCTCTTGATTTAATCAAGTTAATGGCTGTGCCAGCTTTCTTCACTGATCAATCAGAAGCTTCATGTCTAAATGCT AAACAAGGCCTTCGGAATGTTGGACTGCACATCACACAACCGGTGACTCCAAATCCTTTTCGGTCACCTGTGAAAAATCTCACACCTTCTTGCAATCTTC CTTCATACAGCAATGGTTTTGTTTCTGGGGTAAATACATGAATCTGGTCCTAAGAATTCCAAAAATGCGCGTCTATCTACTATTGTTGATTCTCACTGTT GCCGCAAACTTCAATTTTTATCGGCTATGCAGTTCGCTGAACATTACAGCAAACCATGAAGATCATTGCAAGTTTTTATTAAATTTATGAACATTGACTC TTCTTAGCATTCTCTTTTGTATTAATTTTTGAATTATGACCATTGTCTTTGTGCAATTTGGTGTACTGTGCCAACATTTCATGAGTTATTTCATCACAAC TGGCAAGGCTGTCTATTCCTTGCTAAATTGAAGTTTAAA
• Tissue: pods
• Gene name: LI_gene_152063;
• Additional information: details;

Expression of Ll_transcript_500050

FPKM

• PAB: 0.6
• PNAB: 1.9
• PS1: 1.1
• PS2: 0.9
• PS3: 1.1
• PW1: 1.1
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500050

• Blastp: Zinc finger MYND domain-containing protein 15 from Mus with 27.66% of identity
• Blastx: Zinc finger MYND domain-containing protein 15 from Mus with 25.62% of identity
• Eggnog: zinc finger, MYND-type containing 15(ENOG4111I8B)
• Kegg: Link to kegg annotations (574428)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439800.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;