| Id Trinity | TRINITY_DN47371_c12_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_499814 |
| Sequence | ATTGTGGTCATGGAAGCTTCTCAAATGATCATAAGCTGAATAGTGTTGTTGGGCATTTGTTACATTCTTCAATTCTAGTTCCTTATCATGGATGGTATAC TAATGTTTCTGAAGCAATAGCTTTTTCGCTGTTCGTCTATTTTATGAAGGTTCTGAATTGCAGTTCCGTTTGCGTTACGCATTGTGGTTGTTTGTAAAGA CTACCAAATCCGCAATACTATGACTGCAATTTAGAATCTGATATATGCTTTCGCCTTTCATGCTTCTTTCTAGTTTTAAACCCATCTTTGTAATTGGCAT TTTGCTGAACTATGCAGGAGAATCAGTCATAGGACTCATCACCAGAATCATGGTCATGTTGAAAATGATGAATCTTGGCAACCGGTGAGATGATAATTAC TGTCTAGTTCTAAGGATATACTATTTGTCTCGAGATTACGCCGTAACATGTATGTGCCAACTCTCAGTGCTACTCCCTATGATTGGTGTTTTATTTACTT CACGAATCAGAAGGAGCGACACAAGGAGTTGACACATATAAAGAAGGTACATTTGATGTTATTTCAAGCACTAACATGAGATGTTTAATGTCAATATTGC AGTTAACTGAGAAAATGTTCAGGAGCTTGGACAATATGACACGTAACTTAAGATTTACGGCACCTTTTCCATTGCTTGCATATCCTGTGTACCTATTTAG CAGGAGTCCAGGGAAGACTGGTTCTCACTTCCACCCGGACAGCGACTTGTTTGGTCCAAATGAAAGAAATGATATTATCACTTCTACACTCTGTTGGTCT GCTATGGTGGCAATTCTTGTAGGATTGAGTTTTGTAATGGGTGCAGGTCAAGTGTTTATGCTTTATGGTGTTCCATATTGGCTTTTTGTTATGTGGTTGG ATCTTGTGACTTATTTGCATCACCATGGCCATGAAGACAAGTTACCATGGTATCGCGGAAAGGAATGGAGCTACCTAAGGGGTGGTCTTACAACAATTGA TCGCGATTACGGATGGATTAATAACATTCACCATGACATTGGAACTCATGTTGTTCATCACCTTTTCCCTCAAATCCCACACTATCACTTAACTGAAGCT GTAAGTATATATTTTTCTTATGATCAAATGATTAATATAAGGTATATATAGTATTTTCATGGACCCAATAATTTTATTCTTGTTTTTGCTATACATGCAG ACTGAAGCAGCAAAACCTGTGTTTGGAAAATACTACAGAGAACCAAAGAAATCTGGTCCTATTCCTTTTCACCTTGTTGGAGACTTTGTTAGAAGCTTGA AGAAAGATCATTATGTTAGTGACACTGGTGATATTGTGTTCTATGAAAGTGACCCTCAGCTTAGTGGCTCATCAAAATAAGATTAAATAAAGGGACTCAA ATCATTGAATTTTTTGGCTTACTAAGTTACTGTCATATAGTAATAATTCTTGTACAATTTTGAAGAGTGAAGTATATCAAAAAATGGACTATTATTGTTC ATCAATGAAGTAATTCATCCGTTCTTATATAACCGTCATTTTAAGGTTTTGACACATATATTAAGAAAGTTAATTAATGTAGTAAAATTATTCATCAATT TCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_152068; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499814
| Blastp | Omega-3 fatty acid desaturase, chloroplastic from Soja with 82.74% of identity |
|---|---|
| Blastx | Omega-3 fatty acid desaturase, chloroplastic from Soja with 82.74% of identity |
| Eggnog | linoleoyl-CoA desaturase activity(COG3239) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450336.1) |
| Pfam | Fatty acid desaturase (PF00487.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |