Id Trinity | TRINITY_DN47372_c0_g2_i2 |
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Name Transcript | Ll_transcript_501096 |
Sequence | TAACTCCTCCACCCTTCAATTCAAACTTAGGTTCTAGGGCTTTCTGCACTCTCTTTGTTAAAGGAACTTGCCGTTTTTTCTTCCTTCAGTGTTTGAGCCA TTTGAGGTAGAACGAACGAAAATACTAATAGTAACCTCATCAAACAAAAAATGGTGGGATTCAACATGCAACCATATGGGATACAATCCATGCTCAAGGA AGGTCACAAGCATCTCTCTGGTCTCGACGAAGCCGTTTTAAAAAACATCGACGCCTGCAAGCAACTTTCCACTATTACCCGCACTTCTCTCGGTCCTAAT GGTATGAATAAGATGGTGATAAATCATTTGGACAAACTTTTTGTCACAAATGATGCTGCAACTATTGTAAATGAACTCGAGGTTCAGCATCCTGCTGCTA AGATTTTGGTGTTGGCTGGGAAGGCTCAACAAGAGGAAATCGGCGATGGTGCGAATTTGACTATTTCATTTGCTGGAGAGCTTCTGCAGGGTGCTGAGGA ACTTATTCGAATGGGTCTTCACCCGAGCGAGATCATTAGTGGATATTCTAAAGCAATCAACAAGGCTATTGAAATATTGGCTGAACTGGTTGAGAATGGT TCGGAGAATATGGATGTCCGTGATAAAGAGCAAGTTATTTCTAGAATGAAAGCAGCTGTTGCTAGCAAGCAATTTGGTCTAGAAGATACCATATCCTCAC TTGTTGCTGATGCATGCATCCAAGTATGTCCAAAAAACCCTGCAAACTTCAATGTCGACAATGTTCGTGTTGCAAAGCTCTTGGGAGGGGGCTTGCATAA TAGTATAGTTGTTCGAGGATTGGTTTTGAAAGGTGATGCTTCTGGGACTATAAAGCGAATGGAAAAGGCAAAGGTTGCAGTGTTTGTTGGTGGTGTTGAT ACATCTGCAACCGAAACTAAAGGAACTGTCCTCATACATTCAGCGGAGCAGCTAGAAAGCTATTCAAAAACTGAAGAAGCTAAAGTAGAGGAGCTCATCA AGGCAGTAGCAGATTCTGGTGCAAAAGTGATTGTTAGTGGAGCAGCGGTTGGAGAAATGGCATTGCATTTTTGTGAGCGTTACAAGCTTATGGTTCTAAA AATCAGTTCAAAGTTTGAGCTACGTCGATTTTGCCGGACAACTGGTGCTGTTGCTATGCTAAAACTTAGCCAACCAAACCCAGATGATCTTGGATATGTT GATTCTGTTTCAGTGGAGGAAATTGGTGGTGCCAGGGTGACCATTGTAAAAAATGAAGAAGGTGGAAATTCTGTGTCCACTGTTGTTCTGCGAGGAAGTA CAGATAGTATACTAGATGATCTTGAAAGAGCAGTAGATGATGGAGTGAACACTTACAAAGCCATGTGCAAGGATAGCCGTATTGTACCTGGGGCTGCGGC AACTGAAATTGAGTTAGCTAAAAGGGTTAAAGAATTTTCCTTCAAGGAGACAGGATTGGATCAGTATGCTATAGCAAAATTTGCTGAAAGTTTTGAGTTG GTTCCTAGAACTTTAGCTGAGAATGCTGGGCTCAATGCAATGGAGATCATATCTTCTCTGTATGCAGAGCATGCATCTGGAAATACCAAAGTTGGCATTC ATTTGGACGAAGGTGTTTGTAAGGATGTCTCAACCCTGAGCATTTGGGATCTACATGTGACTAAGTCCTTTGCTCTTAAATATGCTGCTGATGCCGCATG CACTGTACTGCGAGTGGACCAGATTATTATGTCAAAACCTGCTGGTGGCCCAAGGAGACAAGAACCTGCTGCTGGCATGGATGAAGACTAAAATTTGAAG ATTTGACTGTTTGTTTTGGTCAAATGTTTCCTGAACTTGGTAACTTGGGATTCCAGTATCAAGATTTTGCTCTCTATTTGGGTGTAAGCAGGATTTCGAG CATATGTTGTAGGTTATTTTATTAAAATGCAAAACTGTCGTCTTAATTTTTATTTTTGATTTTAAATTGGACTTGTCTATTTGCAAAAGTAAATTATTGC CTAATTGTTTTTTTATGAGAGCCTATTTGCATTTGTAACTTAACAAAAGCAAAGATTTTGATTAGTTTAGTAAGTAGTTTAAACATGGTAAAATATCTAA TTCCGTCAACTGTAGTTTTTTTACCAGTTTTGGGTTTGTTTTTTGAAGCATGATGAATGTTGGAATAGTGATTTTCATTCTAAGTTGAGTATATTTTCAT CTTAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_152083; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501096
Blastp | T-complex protein 1 subunit theta from Arabidopsis with 83.58% of identity |
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Blastx | T-complex protein 1 subunit theta from Arabidopsis with 83.58% of identity |
Eggnog | t-complex protein 1(ENOG410XPXR) |
Kegg | Link to kegg annotations (AT3G03960) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428858.1) |
Pfam | TCP-1/cpn60 chaperonin family (PF00118.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |