Id Trinity | TRINITY_DN47376_c0_g3_i1 |
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Name Transcript | Ll_transcript_500062 |
Sequence | GTCTTGATGGTTTTAAGGATCTGGACATGGTAGCCATGAGGAGAAAACTTTTGAATTCCAGAAAACTGTAAATTTCAAGGTTGGAGTTAACCAGATATCT ATCTTGGCTGCCACAGTGGGACTTCCGGACAGTGGAGCATACATGGAACACAGGTATGCTGGACCAAAATCTATAACCATCCTTGGTCAAAACTCTGGAG TGATTGATCTGACTCGTAATGCTTGGGGTTATGAGGTTGGTCTCCAAGGAGAGAAGAATAAAGTTTTCACTGAGAAGGGATCAAAGAAAGTAGAATGGAA AGATGTCAAGGGAAAAGGACATGCTCTTTCCTGGTACAAGACAACATTCCAAACACCAGAAGGAAGGGACCCTGTTGCCATCAAGATGCATGGTATGGGG AAGGGAATGATTTGGGTCAATGGTCTAAGCATTGGTCGACATTGGATGAGTTACCTCTCTCCTCTTGGAGAGCCTACTCAATCTGACTACCACATACCAA GAGCTTTCCTGAAAGAAAAAGAGAACTTGCTTGTTATATTGGAGGAGGAGGAAGCAAGCCCAGAAAACATTGTGATCATGAGAGTGAATAGGGACACAAT ATGCAGCATCATTAGAGACAATGACCCACCAAATGTGAGGTCATGGGCAAGTAAGGGCATGAAACTCACACCTGTTGTGGATAAACTGATGCCAGAAGCT ACCCTCAAGTGTCCAAACCACAAAACCATTGTGGCTGTGGAGTTTGCAAGCTATGGTGATCCTCTAGGTGTATGTGGAGCCTTTACTTTGGGCAAATGTA ATGCACCTATCACCAAACAGGTTGTTGAACAGCTTTGCTTGGGAAAAGAAGCATGCACAGTTCCATTGGAGAAATCAATGTTATTGAAAAATGGTGAGGA TGGTTGCCCAGGTGTGGTGAAGGAACTAGCAATCCAAGTGTTATGTGGCACTGGCGCCTCCAACCAATGAATCATGACAAAATCAATGCCTGTATTTAGC AACTTCTTTTCCTTCATTTAAATTAACAAAGTTGGTAAACAATGTTTCAATTTTGTTTCCTATATATTTTTAGTGAATTTGATTAAAGGATCCAAAAATT CTTGTTGCTGTAAAACTACCCTACATCTTCCATAAAAATAAATAACAAAAATGATATTCTCC BLAST |
Tissue | pods |
Gene name | LI_gene_152098; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500062
Blastp | Beta-galactosidase 11 from Arabidopsis with 54.35% of identity |
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Blastx | Beta-galactosidase 11 from Arabidopsis with 53.72% of identity |
Eggnog | beta-galactosidase(COG1874) |
Kegg | Link to kegg annotations (AT4G35010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412879.1) |
Pfam | Beta-galactosidase jelly roll domain (PF13364.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |