Id Trinity | TRINITY_DN47380_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_500641 |
Sequence | AGAAGATAACATATATCACTTTTTACGAGTAGAAGGAGTGATATGAAAATTTAGTAGGAGACATACTCTTGTAATATATATTAATTTCTTTATGAATATG TCATTTTTTTCGCATAAAAAAAAGCAGAGGAGTTGATAATTGAGTATATGCAGCAGAGTGTAGGGCTGATTGTTAGATTTTGAAATTGAATTTTGTGATG CGAGTGATATGCATATCCAAATCCTCTTCTCTCCCATTATAAGCTATTAAGCAATTCCTATTTCACAGTGTTCATTAATTTAGGGTTTTATCAAAATGAG CACCGCTTCTCACCGTCACACCCTCCCTCCCTCCGCCGCTACCAACCTGGACACTCTCAACCGCATCCTCTCCGACCTCTGCACGCGTGCCAACCCCAAG GATGCTGCCTCTCCATCTCTCAAGAAGCACATAGAAGAGCAAGCCAGAGACCTCACCGGCGAGGCCTTTTCTCGTTTCATGGATCAGTTATATGATCGGA TCTCTTCTCTTCTCGAAAGCACCGATGTTAACGACAACTTCGGAGCCCTCAGGGCCATAGATGAACTCATCGACGTCTCCTTAGGGGAGAATGCTTCCAA GGTTTCCAAATTTTCAACTTATATCAGGAATGTCTTCGATGCCAAGCGTGATCCTGACGTTTTGCTCCATGCTAGTAAGGTTCTCGGTCACCTCGCTAGA GCCGGTGGTGCTATGACCGCTGATGAAGTTGAACGTCAGCTTCAAATTGCTCTTGACTGGCTTAGAGGGACTCGACTCGAGTATCGACGATTTGCTGCTG TCTTAATTTTGAAAGAAATGGCAGAAAATGCTTCAACTGTATTTAATGTCCACGTGCCAGAGTTCGTTGATGCTATTTGGGTTGCTTTGAGGGATCCGGC ATTGCCAGTTCGTGAGCGGGCTGTGGAGGCATTGCGTGCCTGCCTTCGTGTTATTGAAAAACGCGAGACACGCTGGCGTGTGCAGTGGTACTATCGAATG TTTGAGGCAACACAAGATGGATTGGGTAAAAATGCCCCAGTGCACAGCATACATGGTTCACTGCTTGCTGTTGGAGAGCTTCTGAGGAATACTGGTGAGT TCATGATGTCAAGATACCGAGAAGTCGCTGAAATTGTTCTCAGATACCTAGAGCACCGGGACCGTCTTGTTCGCCTGAGCATAACTTCATTGCTGCCTCG AATTGCACATTTCCTGCGTGACCGCTTTGTTACTAACTACTTAACAATATGCATGAGTCATATTCTTTCTGTCTTGAAAGTGCCGCAAGATCGTGATAGT GGGTTCATTGCCCTTGGAGAGATGGCTGGAGCTCTGGATGGGGAACTCATCCATTATTTGCCGACAATAACTACCCACTTACGTGATGCGATTGCGCCAC GTAGGAGTAAGCCTTCACTTGAGGCTTTGGCCTGTATTGGAAGTATTGCCAAAGCAATGGGGCCTGCCATGGAACCTCATGTACGTGGGCTTCTGGATAT TATGTTCTCTACTGGTCTTTCAACTGTACTCGTGGAAGCTCTTGAGCAAATATGTACCAGCATTCCATCTCTGCTGCCTACCATACAAGACCGCTTGCTC GATAGCATATCTATGGTTCTTTTGAAATCCCACTATCACCTGGGGAGGCTTGCGACAAGCATGGGCAGAGGAACAGCAATGAATGCCTCTCAACAATTCT CAGAGCTTACTGGTTCTGCTCTTGTACAGCTTGCTTTGCAGACTCTTGCTCGTTTTAACTTCAAGGGCCATGACCTACTTGAGTTTGTTAGAGAATCAGT TGTTCTCTATTTGGATGATGAGGATGGAGCTACACGAAAAGATGCAGCTCTATGTTGTTGCAAAATAGTTTCTAATTCGTTCTCTGGTATATTGTGTGCA CATTTTGGTTCTAGCCGTTTGAACCGACCAGGAGGAGGGAAGCGTCGTCGCCTTGTTGAGGAGCTTGTGGAGAAGATTCTCATTTCTGCTGTTGCAGATG CTGACGTTACTGTACGCCACTCTATCTTTACATCTCTCCATGGCGATAGAGGTTTTGATGAGTACTTGGCACAGGCTGACAATTTGAGTGCAGTATTTGC TGCTTTAAATGACGAGGACTTAGATGTTCGAGAGTATGCAATTTCTGTGGCTGGAAGGTTATCAGAGAAAAATCCCGCATATGTTCTTCCAGCTCTTCGT CGCCATCTTATACAGCTATTAACATACTTAGAGCAGAGTGCTGATATCAAATGCAAAGAAGAAAGTGCAAAATTACTTGGCTGTTTGATAAGGAATTGTG AACGGCTTATACTTCCATACATTGCTCCAGTACACAAGGCACTTGTGGCCAGACTTAATGATGTTAATGCCAATACTGGAATTGTTAGTGGAGTCCTTGT CACTGTGGGGGATCTAGCCAGAGTGGGTGGTTTTGCAATGAGGCAATACATTCCTGAACTCATGCCTTTAATAGTCGAAGCTTTGTTGGATGGAGCATCC GTCTCCAAACGTGAAGTGGCAGTTGCTACACTAGGTCAAGTTGTACAGAGTACTGGGTATGTTATAACTCCATATAACGAATATCCGCAGTTACTTATCT TACTCTTAAAATTGCTGAATGGTGAACTAGTTTGGTCGACCAGGCGTGAAGTTCTGAAGGTTCTCGGGATTATGGGTGCTCTAGATCCGCATATGCATAA AAGAAATCAAAAAGCTTTGCCAGGGCCTCATGGAGAAATTACTCGTCCTGCTAGTGATTCAAATCAACAAATTCAGACTATGGATGAATTTCCCGCGGAT CTGTGGCCTTCTTTTGCTTCATCAGATGACTATTATTCCACGGTTGCAATTAATTCTCTCATGCGTATATTGCGGGATCCTTCACTTAATATTTACCACT TAAAAGTGATTGGGTCTCTCATGTTCATATTTAAGTCAATGGGGCTCGGCTGTGTTCCGTACTTGCCAAAGGTTTTGCCTGACCTCTTTCATACTGTTCG CGCCTGTGATGAAAATGTTAAGGACTTCATAACATGGAAGCTTGGAACTCTGGTGTCTATTGTGCGGCAGCACATTCGTAAATATTTGCAAGACTTGCTT TCTCTAATATCCGAATTTTGGTCATCATTCACTCTTCCAGCACCAGATCGTCCTCACCTTGGCTATCCAGTTCTTCATCTGGTGGAACAACTTTGCTTGG CTCTTAATGACGAGTTTAGAACATATCTTCCAATTATTCTGCCGGGTTGTATTCAGGTTATTAGTGATGCAGAACGGTGCAACGACTACACATATGTTCT TGATATTCTCCACACTCTTGAAGTGTTTGGTGGGACCTTGGATGAACATATGCATCTACTTCTTCCTGCTCTCATACGTTTGTTTAAAGTGGATGCTTCA GTTGACATAAGACGTGCTGCCATTAAAACTTTGACCCGATTAATTCCTCGTGTGCAGGTCACTGGTCACATATCCTCTCTTGTGCATCACTTGAAGCTAG TTTTGGATGGGAAAAATGATGAGCTCCGGAAGGATGCTGTTGATGCACTTTGCTGTCTGGCCCATGCTCTTGGCGAGGATTTCACAATTTTTATTCCATC AATACACAAACTTCTACTGAAATATCGCTTGAGGCACAAGGAATTTGAGGAAATTGAAGGGCGTTTACAGAGACGTGAACCACTAATCCTTGGGACTACA GCTTCTCAAAGACTGAACCGAAGGGTTCCTGTTGAGGTCATTAGTGATCCTTTAAAAGATCCGGAGAATGATCCTAATGAAGATGGATCTGATGCTCACA AAGTCAGAGGCCATCAGGTTAATGATGGTCGATTACGGACAGCTGGGGAGGCTTCTCAGCGAAGTACTAAGGAAGATTGGGCAGAATGGATGAGACATTT TAGCATTCAACTTCTAAAGGAATCTCCTTCTCCAGCCTTACGAACCTGTGCTAGGCTTGCACAATTACAGCCTTTTGTTGGGCGAGAATTGTTTGCAGCT GGATTTGTCAGCTGTTGGGCACAGCTGAATGAGACCAGCCAGAAACAGTTGGTTCGGAATCTAGAGATGGCCTTTTCATCACCGAATATTCCTCCCGAAA TTTTGGCAACGCTTCTTAACTTGGCTGAGTTCATGGAACATGATGAGAAACCTCTTCCTATAGACATTCGCCTTCTTGGTGCTCTTGCTGAGAAGTGTCG TGCATTTGCAAAAGCCTTGCACTATAAAGAAATGGAATTTGAAGGAGCACGCTCTAAGAAGATGGATGCTAACCCAGTTGCTGTAGTTGAAGCTCTTATT CATATAAACAACCAATTGCACCAACATGAGGCTGCAGATGGAATATTGACCTATGCCCAACAGCATCTTGACTTTCAACTGAAGGAGTCATGGTATGAGA AACTGCAGAGGTGGGATGATGCCCTCATGGCTTATACTGCGAAGGCCTCTCAAGCAACAAGTCCACATCTTGTCTTGGATGCCACTTTAGGTAGAATGAG ATGCCTTGCTTCATTGGCTCGATGGGAGGAGTTGAATAACTTATGTAAGGAATATTGGACCCCAGCTGAACCAGCTGCCCGTCTTGAGATGGCATCAATG GCTGCAAATGCTGCTTGGAACATGGGTGAATGGGACCAGATGGCAGAATATGTGTCCCGATTAGATGATGGTGATGAAACAAAACTTCGAGGCTTAGGCA ATACCGCTTCTGGTGGCGATGGAAGTAGTAATGGTACTTTCTTCAGGGCTGTTCTGTTAGTTCGTATAGGAAAGTATGATGAAGCTCGTGAGTATGTTGA GAGAGCAAGAAAATGTCTGGCAACTGAGCTTGCTGCTCTGGTATTGGAGAGCTATGAACGTGCTTACAGCAATATGGTTCGTGTGCAGCAACTGTCAGAA CTTGAAGAGGTGATTGATTACCGTACGCTTCCTATTGGAGATCGAGTTGCTGAAGAGCGTCGGGCTCTCATTCGAAATATGTGGACTCAGCGTATACAAG GGGCCAAAAGCAATGTTGAGGTTTGGCAGTTACTTTTGGCTGTTAGAGCACTGGTGCTGCCTCCTGTGGAAGACATTGAAACTTGGCTAAAGTTTGCTTC TCTTTGCCGGAAAAATGGTCGCATTAGCCAAGCAAGATCTACTTTAGTTAAGCTTCTACAGTATGATCCTGAAATTTCTCCTGAAAATGTTCGATACCAT GGTCCTCCCCAAGTAATGCTGGCATACTTGAAGTACCAATGGTCGCTTGGAGAGGATTCAAAGCGCAGAGAAGCATTTATTAGGTTGCAGGATTTAGCTA TGGAGCTTTCAAGTGCGCCCAACATTCAACCAGTTACATCGTCTGGCTTCACAAATGGTTTGAATCCATGTGTTCCTCTCCTCGCTCGTGTTAATCTGAT ACTTGGATCCTGGCAGTGGTCACTTTCTCCTGGGCTGGATGACGAGTCCATAAAAGATATACTAGATGCATTTGCAAATGCTACTCAGTATTCAAATAAA TGGGCCAAAGCCTGGCATAAATGGGCATTATTCAATACTGCAGTGATGTCTCATTACACTTTGAGAGGTTTTCCAGACGTTGCAGCACAGTTTGTAGTTG CAGCTGTCACCGGATACTTTCACTCTATAGCATGTGCAGCAAATGCTAAAGGTGTTGACGGTAGTTTACAGGATATTCTTCGGCTTCTAACATTATGGTT CAACCATGGAGCTACAGCAGAAGTTCAAATGGCCCTAAAGAAAGGATTTTCCTTAGTTAATATCAATACTTGGCTAGTAGTTCTACCTCAAATAATTGCA AGGATACACTCTAATAATCATGCTGTGAGAGAGTTGATACAATCACTTTTGGTTCGAATTGGGCAAAATCATCCACAGGCTCTTATGTATCCTTTGCTTG TGGCCTGTAAATCAATAAGCAACTTACGCAAAGCTGCAGCTCAAGAGGTTGTTGACAAAGTTAGGCAGCGTAGTGGTGTCCTTGTGGATCAGGCACAACT TGTATCAAAAGAACTGATCAGGGTTGCTATTCTTTGGCATGAAACCTGGCATGAAGCACTAGAAGAAGCTAGCCGTTTGTATTTTGGTGAACATAACATT GAAGGGATGCTAAAGGTGTTGGAGCCATTGCATGAAATGCTTGAAGAAGGAGCAATGAGAAACAATGTTACCATAAAGGAGAGAATATTTATTGAGGCTT ACCGACAGGAGTTATTAGAGGCTTACGAGTGCTGCGTCAATTACAAGAGAACTGGGAAAGATGCTGAACTTACCCAGGCTTGGGATATATACTATCATGT ATTCAGAAAGATAGATAAGCAACTTCAAAGTCTTACAACTTTAGACTTGGAGTCTGTTTCTCCAGAATTGCTTGAATGCCGCAATTTGGAGCTTGCTGTT CCTGGAACATACCGTGCTGATGCACCAGTGGTTACAATTGCATCATTTGCACGCCAGCTTGTTGTCATAACATCTAAGCAACGGCCTAGGAAGTTGACCA TTCATGGGAGTGATGGTGATGATTATGCCTTCTTATTGAAGGGACATGAGGATTTACGCCAGGATGAACGAGTCATGCAGCTTTTTGGTTTGGTGAATAC TCTGCTTGAGAATTCTAGGAAAACAGCAGAGAAGGATCTTTCTATTGAACGATATGCTGTGATTCCTTTATCTCCAAACAGTGGTTTAATTGAGTGGGTT CCAAATTGTGACACCTTGCATCATCTTATTCGAGAGTACCGAGATGCCAGAAAGATCACCTTGAATCAAGAACACAAATGTATGCTCAGTTTTGCTCCAG ATTATGACCATTTGCCTCTTATAGCTAAAGTGGAGGTGTTTGAATTTGCTTTGGACAATACTGAAGGAAATGACCTAGCAAGGGTGCTTTGGTTGAAAAG TCGAACATCTGAGATTTGGCTAGAGAGGAGGACAAATTATACTAGGAGCTTGGCAGTTATGAGTATGGTTGGTTACCTTCTTGGCTTAGGTGATCGCCAT CCGAGCAATCTTATGTTGCACCGGTTTAGCGGGAAGATTTTACACATAGATTTTGGAGACTGCTTTGAGGCATCAATGAACCGTGAGAAATTCCCAGAAA AGGTTCCTTTCCGCTTGACAAGAATGCTTGAGAAAGCCATGGAAGTTAGTGGTATCGAGGGCAACTTCCGTTCCACATGTGAAAATGTTATGCAAGTTTT GCGGACAAATAAAGATAGTGTTATGGCTATGATGGAGGCCTTTGTCCATGATCCTCTTATAAATTGGCGACTTTTTAACTTCAATGAAGTTCCACAAATG TCCATGCTTACTAGCAATCATGTAACTCCTGCTGTAAATACTGAAGAATCTGCCCAAAATAGAGAGCTTCCCCATCCTCAGCGCGGTGCTCGTGAAAGGG AGCTGCTTCAGGCTGTTAATCAACTTGGTGATGCTAATGAGGTGCTGAATGAGCGCGCTGTGGTTGTCATGGCTCGAATGAGTAATAAGCTTACAGGAAG GGATTTTTCGACGTCTTCAGTACCTAACAGCTCTCTTCAGCATGCAGTGGACCATAGCAGCTTAGTTTCTGGGGACACTCGTGAAGTTGATCATGCTTTA TCTGTGAAATTGCAAGTTCAAAAGTTAATTGGCCAGGCCACCTCACATGAAAATTTGTGCCAAAATTATGTTGGGTGGTGCCCTTTCTGGTAAAATCTCA AGGATAGCAATAAATTCATATGTATATAATGTGTACATATTGAAGACATACCGTGGATCGTAGATAGTCCTCTCACATCTCTATTTTATGTACGTTATAT ACAGTCTTCAGCTTCTCAAAACTCTAGTGTGCTTGCTTGTTTGGTCCTTAATATTATACTTCAGATCACATTTCAACCGGATCTTTGTAAATACCATTAG TTCTTGTTAGCGCGTCCATGTAAATCTATTTACATTGTCTTGTACTTTGGTCATGAATAATATGAATTGAAAATGTGTAGTTGCTAATGAAGCCTCATTC TGATTTCTCCAAAATATATCACTTCTAAGTGACTTGAAATTCAAATATTATGATATTTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_152123; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500641
Blastp | Serine/threonine-protein kinase TOR from Arabidopsis with 80.88% of identity |
---|---|
Blastx | Serine/threonine-protein kinase TOR from Arabidopsis with 80.88% of identity |
Eggnog | phosphatidylinositol kinase activity(COG5032) |
Kegg | Link to kegg annotations (AT1G50030) |
CantataDB | Link to cantataDB annotations (CNT0002730) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423211.1) |
Pfam | Domain of unknown function (DUF3385) (PF11865.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |