Ll_transcript_500654

• Id Trinity: TRINITY_DN47380_c0_g4_i4
• Name Transcript: Ll_transcript_500654
• Sequence: CAGATACCTAGAGCCTATAATAGAGGATTCAAACTCCTTTTTACTCTTCCAGTGGCTTCTCTCTCCCTCTACAACTGTTCCATCCCAAACGGAACACGTG GCAGTATAAGCTGAACGATTACGATTAAAAAGAAAATAACATAAGAGATTGTGGCAAGAAAATGGAGAAGATTCGGAAAAGGAAGCAAGTAGAGCGTGAA CAACAACACCCAAAGTCCAAATCGATTCGTGGTTCTCGAAAACCAACCACCACCAACGACAAAGACCCATACCCGTTTCACACTCGACCCGACCCACAAG AATGCCAAGCCATACGAGACATTCTACTATCACTCCACGCCATTCCTCCAGAACTTGCCAAGTACCGCCAACTACAATCACCAAACGACACCGTTCAACA AGAGACCGTTCTTGACGGTTTGGTCCGAACCGTCCTCTCTCAGAACACTACTGAAACTAATTCCCAACGCGCTTTTCATTCTCTCAAAGCTTCCTTTCCT ACTTGGGAACATGTGCTTAGTGCTGAATCGAAGGATTTGGAAAATGCGATTCGATGCGGTGGTTTAGCTCCAACTAAGTCTTCTTGTATTAAGAATGTGC TGCGCCTTTTGGTTGAAAGAAGAGGGAAGATGTGCTTAGAGTATCTGCGGGACTTGTCTATTGATGAAATTAAGGCTGAACTATCCCTTTTCAAAGGAAT TGGTCCCAAAACAGTACGGTTTTGTTACTTCCTAACAGACTGTTTTATAATTTGCAATGACATTATAGTTTTCTTAATTTGCATAGCATCATCATTGGGT ATTTGCTACTGCGGAATGTTACTTAACTAGCCTTTGGTACAAGTGTCGACACTTTTATAAATAGAACAAAACATGACATGCAATTTAAGGCTGGGGCAAT TGGTGCTCCCAAATGCCTATTTAAACTTCTCGTTGACCAATCACAAACTTAGTGAGGGGTGTAGATAGTTAATTTGAAGTGCATATACTGAGGTAGGAAG AGAATATAGCATAAATCTTGTTCTGTCTGTTTAATTTTACCTTATTTTCGAGTCTTTTTGTGCCTCTGCTTGAAACCTATTGGAAAACCTGATTTTACTA GAATCTGAGTTTCAGATTTAGCACAAGTTGTGCATTTGGTTGACAATAATTTGCCAAGCCACATTTAAGCTTTGCCCTCTTTGCAGCCTTGTTAGTTTCA TCTGATATATTTCAACTGGTAAATGGTTGCTACCAACATGGCCACATTACATTTCACAATCTGAACCACGTGGCAGTGTGGCACAATTACTTTACTTGTT AGGTTTGTTTCTGATTGTAAGGGCTTTCTTAATCATTGGATTCAGCAATTTTAGCTTATCTTGTATTTAGTTCTTATATATAGCAGTTATACTTTGGTAA AAGTTTTAACTTTTGCGCGTTATCTTGTTTCCATTCAGTTTTCGTACTTGTCTCCTTTAAATTTCAGTGCTACTTTCTTTGTTCCCACTCAAAGCCACCT TTCTCCATAGTTCTAAATTGATCTGTAAATTTTATCTTTAAAAGAAATTGTAACTGTGATAAAATGATAAACATCCAAGTAGCCATTTTCTTTTATCCAT TTCTGCTAAGAAATTCTGTTTAGTGGAGTTCGAGTATTACACACTATGATCATTGTGCAGCCACCTTGATTTTTGCCTTCTCCTTACAAAGAAAAAATAG TTACTCATGTCTTTATTGGGTAATTTCTTCTGTTAGTACTTAAAAAACTAAAGGTAAAGATGATGATTGATTGTATTTTTTTATGATTAAATCCAGCATG CCAATTGCTAAAATATGTGGCACTTCTTTCAATTGAACATAAATGCACATGTCCCTTTCTTAGTTTTGTTTGACTCTCTAAATAATAGAATTGATAATAG GTGGCTTGTGTGTTGATGTTCAATCTTCAGCTAGACGATTTTCCTGTGGACACTCATATATTTGAGATTGCAAAAACAATTGGTTGGGTACCAGCAGTTG CAGACAGAAATAAGACATATCTTCATCTAAACCAAAGGATCCCAAATGAACTTAAGTTTGAGCTGAATTGTCTTTTGTATACGCACGGGAAGCTCTGTCG AAAATGCACCAGTAAAAGGGGTAACCAGCAACCTAAGAAATGTGATGATAATAACTCATGTCCTTTATTGGATTATTATAAAGAGTCAAGTTGAACTTTG ATTCACTAAAGCATCATGGTGTATGGACCATACTATATAGATTATGGCCTTCCTGGTTTTGTAATAACTGTATAGAATATACTAGTGTTGTAGACTTGTG CAGGACTGCAATTTTAAAAGGGTTGTTTGTTACCCCAATTTTATGTGCAACACATTGGTGTCCCTGCTTGGTGTAAAAAAGATTACTGTTTGAAATGTTA GCAGAAAGAGAGGGTGGCAAATATGTTGTAGAGTTGCAAGTAAAATTATGTGAAGCTACTTGTGTTTTTAGAGAAATAAGGAAAGAACATGGTCCTACAA GATTAAAGAGCACAAGCAACAGGTTGGTTTAAGTGGTATATGTTTGATTCTTCGTAAGGTAGGTCTCGGGTTTAAGTCTTTTGGATGGAAAAAATGTTTG CTGAGAGTTAGCCCTACATATCTGTGTATGTTTCTGCCTCGGATAAAATTGCTTTCAGTGTGATGATACTTGTGAGAAATAAAAAAAATTGCAAGCACTG GCAGGCTAAATTTTTGTAATTATTTTGATTTGCTTTTGGTTAGTACTGGCAGGAACTAGGAGGCCTCTATTAATTCAAGATATATTTTAGGGGACAAAAC TATGTTTCTATCACAATTTGAG
• Tissue: pods
• Gene name: LI_gene_152126;
• Additional information: details;

Expression of Ll_transcript_500654

FPKM

• PAB: 0.5
• PNAB: 0.6
• PS1: 0.7
• PS2: 0.1
• PS3: 0.4
• PW1: 0.5
• PW2: 0.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500654

• Blastp: Putative DNA glycosylase At3g47830 from Arabidopsis with 51.46% of identity
• Blastx: Putative DNA glycosylase At3g47830 from Arabidopsis with 51.21% of identity
• Eggnog: endonuclease III(COG0177)
• Kegg: Link to kegg annotations (AT3G47830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456610.1)
• Pfam: HhH-GPD superfamily base excision DNA repair protein (PF00730.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;