| Id Trinity | TRINITY_DN47380_c0_g4_i5 |
|---|---|
| Name Transcript | Ll_transcript_500656 |
| Sequence | CAGATACCTAGAGCCTATAATAGAGGATTCAAACTCCTTTTTACTCTTCCAGTGGCTTCTCTCTCCCTCTACAACTGTTCCATCCCAAACGGAACACGTG GCAGTATAAGCTGAACGATTACGATTAAAAAGAAAATAACATAAGAGATTGTGGCAAGAAAATGGAGAAGATTCGGAAAAGGAAGCAAGTAGAGCGTGAA CAACAACACCCAAAGTCCAAATCGATTCGTGGTTCTCGAAAACCAACCACCACCAACGACAAAGACCCATACCCGTTTCACACTCGACCCGACCCACAAG AATGCCAAGCCATACGAGACATTCTACTATCACTCCACGCCATTCCTCCAGAACTTGCCAAGTACCGCCAACTACAATCACCAAACGACACCGTTCAACA AGAGACCGTTCTTGACGGTTTGGTCCGAACCGTCCTCTCTCAGAACACTACTGAAACTAATTCCCAACGCGCTTTTCATTCTCTCAAAGCTTCCTTTCCT ACTTGGGAACATGTACGTAACCTAACATTGTTTTTTTATTTAAATTGTTGTGTTCCGTAACATGTTCACTAGTTGAGTTTTGAAAGGGACGAAATGAGGG CTTCAGAGTATATTAGGAGTGTATTTTATGGCTATCAAATCTTCCTTTTCCCGGTCCGTTTGTGAGTTGAGTTTTTGATGAGAATGAAGAGGACCCCTGG AATACACGTGCTTAGTGCTGAATCGAAGGATTTGGAAAATGCGATTCGATGCGGTGGTTTAGCTCCAACTAAGTCTTCTTGTATTAAGAATGTGCTGCGC CTTTTGGTTGAAAGAAGAGGGAAGATGTGCTTAGAGTATCTGCGGGACTTGTCTATTGATGAAATTAAGGCTGAACTATCCCTTTTCAAAGGAATTGGTC CCAAAACAGTACGGTTTTGTTACTTCCTAACAGACTGTTTTATAATTTGCAATGACATTATAGTTTTCTTAATTTGCATAGCATCATCATTGGGTATTTG CTACTGCGGAATGTTACTTAACTAGCCTTTGGTACAAGTGTCGACACTTTTATAAATAGAACAAAACATGACATGCAATTTAAGGCTGGGGCAATTGGTG CTCCCAAATGCCTATTTAAACTTCTCGTTGACCAATCACAAACTTAGTGAGGGGTGTAGATAGTTAATTTGAAGTGCATATACTGAGGTAGGAAGAGAAT ATAGCATAAATCTTGTTCTGTCTGTTTAATTTTACCTTATTTTCGAGTCTTTTTGTGCCTCTGCTTGAAACCTATTGGAAAACCTGATTTTACTAGAATC TGAGTTTCAGATTTAGCACAAGTTGTGCATTTGGTTGACAATAATTTGCCAAGCCACATTTAAGCTTTGCCCTCTTTGCAGCCTTGTTAGTTTCATCTGA TATATTTCAACTGGTAAATGGTTGCTACCAACATGGCCACATTACATTTCACAATCTGAACCACGTGGCAGTGTGGCACAATTACTTTACTTGTTAGGTT TGTTTCTGATTGTAAGGGCTTTCTTAATCATTGGATTCAGCAATTTTAGCTTATCTTGTATTTAGTTCTTATATATAGCAGTTATACTTTGGTAAAAGTT TTAACTTTTGCGCGTTATCTTGTTTCCATTCAGTTTTCGTACTTGTCTCCTTTAAATTTCAGTGCTACTTTCTTTGTTCCCACTCAAAGCCACCTTTCTC CATAGTTCTAAATTGATCTGTAAATTTTATCTTTAAAAGAAATTGTAACTGTGATAAAATGATAAACATCCAAGTAGCCATTTTCTTTTATCCATTTCTG CTAAGAAATTCTGTTTAGTGGAGTTCGAGTATTACACACTATGATCATTGTGCAGCCACCTTGATTTTTGCCTTCTCCTTACAAAGAAAAAATAGTTACT CATGTCTTTATTGGGTAATTTCTTCTGTTAGTACTTAAAAAACTAAAGGTAAAGATGATGATTGATTGTATTTTTTTATGATTAAATCCAGCATGCCAAT TGCTAAAATATGTGGCACTTCTTTCAATTGAACATAAATGCACATGTCCCTTTCTTAGTTTTGTTTGACTCTCTAAATAATAGAATTGATAATAGGTGGC TTGTGTGTTGATGTTCAATCTTCAGCTAGACGATTTTCCTGTGGACACTCATGTAAGTATGGTTCAATCTTTCATTACAGAACATGACTGCATTGGTTTA ATTCTAACACTAGCATACTTATGCAGATATTTGAGATTGCAAAAACAATTGGTTGGGTACCAGCAGTTGCAGACAGAAATAAGACATATCTTCATCTAAA CCAAAGGATCCCAAATGAACTTAAGTTTGAGCTGAATTGTCTTTTGTATACGCACGGGAAGCTCTGTCGAAAATGCACCAGTAAAAGGGGTAACCAGCAA CCTAAGAAATGTGATGATAATAACTCATGTCCTTTATTGGATTATTATAAAGAGTCAAGTTGAACTTTGATTCACTAAAGCATCATGGTGTATGGACCAT ACTATATAGATTATGGCCTTCCTGGTTTTGTAATAACTGTATAGAATATACTAGTGTTGTAGACTTGTGCAGGACTGCAATTTTAAAAGGGTTGTTTGTT ACCCCAATTTTATGTGCAACACATTGGTGTCCCTGCTTGGTGTAAAAAAGATTACTGTTTGAAATGTTAGCAGAAAGAGAGGGTGGCAAATATGTTGTAG AGTTGCAAGTAAAATTATGTGAAGCTACTTGTGTTTTTAGAGAAATAAGGAAAGAACATGGTCCTACAAGATTAAAGAGCACAAGCAACAGGTTGGTTTA AGTGGTATATGTTTGATTCTTCGTAAGGTAGGTCTCGGGTTTAAGTCTTTTGGATGGAAAAAATGTTTGCTGAGAGTTAGCCCTACATATCTGTGTATGT TTCTGCCTCGGATAAAATTGCTTTCAGTGTGATGATACTTGTGAGAAATAAAAAAAATTGCAAGCACTGGCAGGCTAAATTTTTGTAATTATTTTGATTT GCTTTTGGTTAGTACTGGCAGGAACTAGGAGGCCTCTATTAATTCAAGATATATTTTAGGGGACAAAACTATGTTTCTATCACAATTTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_152126; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500656
| Blastp | Putative DNA glycosylase At3g47830 from Arabidopsis with 69.12% of identity |
|---|---|
| Blastx | Putative DNA glycosylase At3g47830 from Arabidopsis with 59.21% of identity |
| Eggnog | endonuclease III(COG0177) |
| Kegg | Link to kegg annotations (AT3G47830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456600.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |