| Id Trinity | TRINITY_DN47381_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_501971 |
| Sequence | AGCAATCTTTGAAAAGTGCCATTTGAAGCTCCAAAACACAATCTCTTAATCTTCAATGGCTTCATTACTCAACTTGGTTTCACTTTCACCAAAAACATTC TCAAACACTAGAACAACAACCTCTTCACTTCAACCTCGGATTCTCCAACATCCATCTTCTCTCTCATTCAACAATAGTAGGTGGAGATTCACTGTTAGAG CAGCTGAAACTGATGCCAATGAAGCAGTTAAATCTCAGGCACCAGATAAGGCTCCTAGTAAGGATGGTTCAAGCTTCAATCAGCTTCTTGGTATTAAAGG AGCTGCCCAAGAAACAAATAAATGGAAGATTCGTCTTCAACTGACAAAGCCTGTCACTTGGCCTCCATTAGTTTGGGGTGTAGTTTGTGGTGCCGCCGCC TCTGGGAATTTCCACTGGACTTTTGAGGATGTTGCAAAATCAATTTTGTGCATGCTGATGTCTGGGCCATTCTTGACAGGATATACACAGGTAATATGTT TTGTTGATATAATGTTTTATCCTCGAAACAGCCTCTCCCGCTTCCGGAGGTACGGCTACGTACATCTACGCTCTCGCAGACCCCACTAAGTGGGAGTTTC GGGTACTGGGCTGCACTTTTAAATAAAGTTTTCTCGACTGCTATAACCTTGATTTGTTGTGCTCTTCATTTTTTAGACTATGAATGATTGGTATGACCGC GAAATCGATGCAATAAATGAACCTTATCGGCCAATTCCTTCAGGGGCAATAGCTGAGAATGAGGTAATCACTCAAATATGGGTGCTACTACTAGGAGGCC TTGCTGTGGCTGGTACATTGGACATATGGGCAGGGCATGATTTTCCGATACTTTTTTACCTCGCTGTGGGTGGATCCTTGCTGTCATATATTTATTCAGC ACCTCCTTTAAAGCTAAAACAAAATGGATGGATAGGAAACTTTGCCCTTGGAGCAAGTTACATTAGTTTGCCATGGTGGGCTGGTCAGGCTTTGTTTGGG ACCCTTACTCCAGACATAATTGTTCTCACAATCTTATACAGCATAGCTGGATTGGGAATTGCCATTGTCAATGACTTCAAAAGTATTGAAGGGGATAGGG CTTTAGGGCTTCAGTCCTTGCCAGTTGCTTTTGGTGCTGAAACTGCTAAGTGGATATGTGTTGGAGCTATTGACATTACACAATTATCTGTTGCTGGATA TTTGCTTGGGGCTGGTAAACCATATTATGCATTGGCTTTAGTTGGCTTAATAGTTCCACAAGTCATATTTCAGTTTAAGTACTTCCTCAAGGACCCAGTG AAATATGATGTTAAATATCAGGCTAGTGCACAACCATTTCTGGTGCTTGGTCTATTGGTTACTGCCCTAGCCACTAGCCACTAGCCACTAATCTTATGTG CAAAACTTACCATAAGGCATGAAGGGTAGAATCAAGAATTCAAGATAAAGAAGGGAAGCACAAAACATCTCAGACTCAAGTTCATTTTAGACATGCACCA TATTTTTGTTTGTTTCATGTTTTTTCATCCTCTATTTTTTTACTGTGCTTTCCATTTACTTATCCACATAGTTTATACTGAAGAGAGGTTTATTTTTAGA AATCTTTGCAAAATAATCAATTTATGTTATTTCATATTTTGTCTAGAACTCAGAAGACCTTGGTATCTAGCTTCACTATATTTGTGTTGTATATGAAGGA TCACAGATTGGATAAAAGCATATGAATCCTAAAGATTTCAATATTCTAGGAACTTTTGAGAGTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_152135; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501971
| Blastp | Chlorophyll synthase, chloroplastic from Oryza sativa with 88.89% of identity |
|---|---|
| Blastx | Chlorophyll synthase, chloroplastic from Oryza sativa with 88.94% of identity |
| Eggnog | Synthesis of 3-octaprenyl-4-hydroxybenzoate (By similarity)(COG0382) |
| Kegg | Link to kegg annotations (4338498) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462286.1) |
| Pfam | UbiA prenyltransferase family (PF01040.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |