Ll_transcript_501051

• Id Trinity: TRINITY_DN47385_c0_g1_i1
• Name Transcript: Ll_transcript_501051
• Sequence: TGGGAGGGTATTTTCTACATCTTTGGGTTCCCCAGCTATGCAGAAAATCAGCTTCAAAATCGACGCTTTATGAACAGTTTGAAATCTCATGCAGAGTTTC AAAGGGATAAGATGATGGGTATTTCCAAATTTTAATTTTTCTGAAACTATTACTTTGATTTTACATATTTTGAAATTGAAGTGAATCACTTGCTACAAAT TAGAAATACATAAGTTTTCTGTCTTTTTCATTCATTCGAAATGAAACTAAGCTTAAGCAGTGTATATACTCCTTATAGTTTCCCTATAATCCTTAAATCT TATGCATTTAGCAATCTATGTAAACCCTTTTGTTCTTCAGCACTATCATCATCTCCACCAATTTCATTGAAACCCCAAGTTCCCCTTTTTCTAAGGCCAC CAATTTACTCAACCAAGTTCTGTAACTTCAAAAAATGGCATGATTGGGCCAAAGGTATTGCTTCTTCAATTGGGTCAACTTTTGTTAACTCAGATAATGG CCCAGACTCAAGCATTTTGTGCAGGGAACTCAAGTGGTTAATGGAAGATGCTGTTGAAGACCACTCACTTTTTTCCAAGATGGATTTTGAGAATTATGAT GAGAGGGTGAAAATGAGGGTTGGGATAGAAGAGCTTTATGATCTTTGGAAGGAGAGGATAGAAAAGAGGAGACCTTTTCAGTATGTAGTTGGTTGTGAGC ATTGGAGGGATTTGGTGTTGAGTGTCCAAGAAGGGGTTTTGATTCCAAGACCCGAGACGGAACTTATTGTTGATTTTGTGTGTGATGTGGTATCGAAGAA TGAGGATTTGAAAAGAGGGGTTTGGGCCGATTTGGGGACCGGAAGCGGTGCCCTTGCTATAGGCATTGGTGGGGCTTTGGGAATAGGAGGGAGGGTTATT GCCACAGATATAAACCCCGTGTCAGTTGCGGTTGCAGCTTATAATGTGCAAAGGACAAAATTGAAGTAAGGGAAGGATCTTGGTTTGAACCATTGAAGGA TATAGAAGGAAAGCTTGCAGGTCTTGTAAGTAACCCACCATATATACCAAGTAAGGAAATCTCTGGTCTACAAGCCGAAGTTGGTAGACATGAACCTCGA GTTGCATTAGATGGAGGTATTGATGGCATGGATTATCTTTTCCATCTCTGTGATGGGGCTGCTTTATTCTTGAAACCTGGTGGATATTTTGCCTTTGAGA CAAATGGGGAGCAGCAATGCAGGGCTCTTGTTGATTACATGAAAAATAAGAGAAGTGAAAGCTTATGCAATTTTGAAATAGTTGCTGATTTTGCTGGTAT TCAAAGATTTGTAATTGGATTCCACCATTAAGCACATTGAGTTACAAAATACATGTTTATTTTATTGGTATTGAGGCAAAGACCAAGTGAAAACAAATCA AGATTCAAGGGTAACTCATTGTTTTCCACATTGGTCATGGTTTCTTTTCAGTTTTTTGGACCAACTGTTGTAGACATTGTTTGGAAGGCATGCTTTTTTG TTACAGATTTAGCCCACCGACCCGACAGTATAATTTTTACACCGTCAAAATACCATTCAGCATTGATTTGTATTAATTTTGTTTGAAAGTCAGTAGTAGT TAAATATAAAT
• Tissue: pods
• Gene name: LI_gene_152168;
• Additional information: details;

Expression of Ll_transcript_501051

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.3
• PS2: 0.6
• PS3: 0.2
• PW1: 0.6
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501051

• Blastp: Release factor glutamine methyltransferase from Thermosynechococcus with 32.4% of identity
• Blastx: Release factor glutamine methyltransferase from Synechocystis with 40% of identity
• Eggnog: Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif (By similarity)(COG2890)
• Kegg: Link to kegg annotations (tlr1836)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443714.1)
• Pfam: Ribosomal protein L11 methyltransferase (PrmA) (PF06325.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;