Id Trinity | TRINITY_DN47388_c4_g2_i2 |
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Name Transcript | Ll_transcript_499986 |
Sequence | GGTAGCTTCATACACTATTATGTGGCTAAGAATAAAGCAAGTAGAAGTAGCTTTTGTGTTTCTCTAAAATTAATGATAATGGCTTCATCATGGTTTGGAA CTACCATTACTATTCTTCCATTTCAATTCTATAACAAACTTAACAGAAACCCAACATTAGTTACTTTCAGTTGCACTAACAAACACAAAGACAAAGACCA TGTTCCTCTTTCTGTTTCTTCAGCTTATGATGTCCTAGGAGTTAATCCTCATTCTTCTCCCTTTGATATAAAAGCTGCTTTTCGGTCAAAAGTGAAGCAG TTTCATCCAGATGTTAATAGAAATGAAGGGAATTCTGATGCTATGATTCGTAGTGTAATTCAGGCATATCAGATACTATCCAACTACACCAAAGCAGAGA TAATTGAAAGGGAATGCTTAGATCCCTTTGACACACCAGAGTGTGAAGCTTATGATCTTTTTGTTAATGAGCTTCTTTGTGTTGGCAAAGGGTGTTCAAA TTCATGTGTGGAAAGATCCCCTCATGCTTTCACGTATGTTTCTTCAACTGGAACAGCACGTGCATCTTCTCAAGGTCATGGTGATGATTATCGAGTTCAA AGTGCTGTTGGACAATGCCCTAGAAGTTGCATTCATTATGTAACTCCATCACAAAGAATTATATTGGAGGAGCTACTTGATAGTGTAGTAGGTGCACCTT ATGATACATCAGCTGAGGCAGACATGCTTTATTCACTCATAACTAAAGCTAAGTTTGAGAATAACAGATACCAAAAGCCAAAGAAGCAACCCAAAAGTTC AAGCCAACATGTTGATTGGTTTTAACATTTGGATACCAACTATGCCTATGTTAATGTCTTTAGTCCCCAACCTATGGCACTGTTTAGTGAGACGTTGTTT TTAATACTACTAAGAAAAGGCATTGTTATATATTTGTATTTCAATTTATTAAACATGCAAGAAGAATAGAAGAATATAAGTTACTAAAAATTTCAGGTAT TTCTTTCATTTTAAAGAGAGâBLAST |
Tissue | pods |
Gene name | LI_gene_152221; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499986
Blastp | Chaperone protein dnaJ C76, chloroplastic from Arabidopsis with 29.09% of identity |
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Blastx | Chaperone protein dnaJ C76, chloroplastic from Arabidopsis with 29.09% of identity |
Eggnog | Ferredoxin(COG1141) |
Kegg | Link to kegg annotations (AT5G23240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419813.1) |
Pfam | DnaJ domain (PF00226.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |