Ll_transcript_499819

• Id Trinity: TRINITY_DN47391_c0_g2_i1
• Name Transcript: Ll_transcript_499819
• Sequence: TTGCCCTTGTACTTGTTCAATTATTACTTAGATAATGATATTGGATATATGAAATTGAGTTTGATGCAATGGTAAGGTTTTTGCGTAGTGACCATGAGAT CATGGGTTCAAGTCTGGAAACACCCTCTCGGCTTGCGGGGGTAGAGCTGTGTGCGTCTACCTTTCCCATACCCCACTGAGAATCTCGTGTACCGGACCAC CCTTTTATTATAGTTTTACTGCATTCAAATCCTGTTAAAATACAGTTATTTTCAGTGACTTCGTACCCATTAATATGTTTCTCCCACATGATTTTTTTTT GTTAATTGAAAATACCACTAATGTAAATGTGCTACAAATCTTAAGTTCATATTTTATATATTTCAATATTCTGAATAGAATTTATCCACCTATTGTAAAA TGTTTCTTGGCATGAAAGGTCACATGTATTATTGGAATACTAAATTCATTTACTTACAGCAAAAGGACTAGTGGTTTTGATATGGCTCCCCCTGCTTCAG CACTGTTAGCTGGTGCTTCTGCTGTTACAGGTACATTTACTCTCATATATCATGCATCTGATTTTTTAATCTTAACTGCTTTGTTCCTTTTGTTCTAGTA TGGAAAATTCATATCAAATTGCATGGTGCTTACTTGGTAAGAAATGTTCTGTTATTATATGAATATATAGCTCCTTGAAGACTGGTTTCCCATGCTCTGT AATTGTCTTTCTTTTAACTTTTGATTTAATTCTGGAACTAAAAGATGCTTTGGTTTTTGTCTTGTGTTTGGTGTTTCTTTTGTTTTTGTCTTGTCTTATG TTCTAAGAAGGCAATGTTGGGCTACTAGCCCCAATGTGCTGACAATGGCCTGAGCCGACATTTGTAGCTTTATTGTCCACGGAGGAATGAATGCACCAGT TTTTGGTGGGTCTGGTTCGTCTACATCTGGAAACTGTTGGCCACTTTGGTCAGATGATTGCGACAAATGCTGCAATTCCTGGAGTGTTTCAAAATATGTT TCCATTGGCTACAAGTCAGGTGCAGCCATTCAGTGCTCTCCCTGTCATGCCAGTGCAGGCTATGACACAACAGGCTACTCGACATGCTAGGCGGGTGTAT GTTGGGGGCCTCTCTCCTACAGCCAATGAGCAGTCAGTTGCTACTTTCTTCAGTCAAGTTATGGCTAACATTGGAGGGAACACTGCCGGCCCAGGTGATG CCGTGGTCAATGTTTACATTAACCATGACAAGAAGTTTGCCTTTGTAGAGATGAGGTCCGTTGAGGAAGCTAGCAATGCAATGGCTTTAGATGGTATTAT TTTTGAGGGGGCACCTGTTAAGGTTAGGAGACCTACTGATTATAATCCTTCTCTAGCTGCTACCTTAGGCCCAAGCCAACCTAACCCAAATCTTAACCTG GGTGCTGTTGGCTTGACACCTGGGTCGGCTGGTGGACTTGATGGGCCTGATCGGATTTTTGTGGGTGGACTTCCTTATTACTTCACTGAAACACAGATCA GGGAGCTTTTAGAGACATTTGGTCCTCTAAGGGGTTTTGATTTGGTGAAAGACAGAGAAACTGGAAACTCGAAGGGCTATGCATTTTGTGTTTACCAAGA CCTCGCAGTTACAGATATTGCATGTGCAGCTCTCAATGGAATAAAAATGGGAGATAAGACTCTGACTGTTAGACGAGCTAATCAAGGTTCAAACCTGGTG CAGCCTAAACCTGAGCAAGAGAGCATTTTAATGCACGCACAGCAGCAGATTGCCCTGCAGAAACTTATGTTACAACCAGCATTAGTGGCAACAAAGGTGG TTTGCTTAACTCATGCAGTTGCTGCTGATGAACTCAAAGATGATGAGGACTACGAAGAGATTCTTGATGATATGAGACAGGAGTGCTCCAAATTTGGTAC TTTGGTGAATGTGGTGATCCCTCGCCCACGACCAGATGGTGAACTGGCCCCTGGAGTTGGAAAGGTGTTTTTGGAGTATGTTGATGTTGATGGTGCTACA AAAGCCCGTGTTGGATTGAACGGAAGAAAATTTGGTGGAAATCAAGTTATAGCTGTGTTTTATCCAGAGAACAAATTCGCCCAAGGAGATTATGAAGGCT AGTTGAATTGCTATGACATTGTATCTTAAAAGATTTCTTCTTACAGGAGCTGCATGCATTTCGTATAATACAGAAACTTATGGATTCTATTTTATTTTAT CTGATGGCTGTAAGATAGTGATTGCGATTATGGAGAATGGGTAGGGATGATGAAAAGGTACCAAATGCAAAACTATGAAGATGTTATGGTAATTTGTTAA AGGGCAAGGATATCTAAACACCTCCCTTACTTTTACTTGCAATCCCAATTAGCCGTAGATATCAAATATCTAAATACTCATGGGTTGAAAATAGATGACA GGCTTAACAAGGGTTGAATTGTGATAACCTATTTTCGAAAACACACTTTTTAAAAAAAAGTAGTTTTTTAACACTCCATATAAG
• Tissue: pods
• Gene name: LI_gene_152244;
• Additional information: details;

Expression of Ll_transcript_499819

FPKM

• PAB: 1.9
• PNAB: 2.2
• PS1: 1.2
• PS2: 2.3
• PS3: 3
• PW1: 1.2
• PW2: 2.1
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_499819

• Blastp: Splicing factor U2af large subunit B from Nicotiana with 82.55% of identity
• Blastx: Splicing factor U2af large subunit B from Nicotiana with 82.55% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000929)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440705.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;