Id Trinity | TRINITY_DN47410_c4_g2_i2 |
---|---|
Name Transcript | Ll_transcript_476936 |
Sequence | CCAGAATATGATTTTTCTTTACCTTTTTATTTTCCTGAAAGGGATATAATTGCTGATGCAAATATACTTCAAGGTGCAATCTTTCATGAGGATGCTGTTG AGGAATCTGATGTATGTGCAGCAACTGAATCTGATCAGGTTGAAAACCAAAATGGAAAAGAATATACATGGAACCCTCTTGAAAAAAGATTTAAGCAACA GAAGAGTAAATCCAAACCTGCTGCTCATAGGGGTTTCATGGCTCGTGCTAAAGGAATACCTGCTTTGGAATTGTATAGGCTTGCCCAAAAGAAGAAACGA AAACTTGTTTTATGTGGCCATTCACTTGGTGGAGCAGTAGCTGCGTTAGCTACTCTTGCCATTTTGAGAGTAATTGCTGCTTCATCTCCAACAAGGGAAA ATGAGAGAGTCTCTATCAAATGTATAACATTTTCTCAACCTCCTGTTGGAAATGCTGCTTTGAAGGACTATGTTAATAGAAAAGGTTGGCAGCATTATTT CAAGAGTTACTGCATCCCAGAGGATTTGGTTCCCCGTATTTTATCTCCTGCTTATTTTCACCATTATAGTGCTCAGCCTCAGTCAATCCTTTCTGATAAT GAAAGTAACATCTTATTAGCGACAAAACATGAGCAAGGGGTAGGGAAGCCAAAAGAGAATGATGAGGAGCAATTAGTTTTGGGGGTAGGTCCTGTGCAGA GATCCTTCTGGAGACTCTCAAGGCTAGTTCCTTTAGAAGGACTACAAAGAAAGTTTAGTAAACACCGAGAAAGACAAATGAGTTCTGTTGAAACAACTTC TGTGCATGATTCTCTTGCCAGCAGTTTGATTGGGGAGGAAGTAGTTGAACCGCAGTCACTTGAAATACAAGAGGGTTCTGATGGCATATCTCTCAAGCCT CTACCTGACACTGAAAAACATGCATTGGAGGCGGTAACAAATGGGAAAACAGACACAAAGAGCAATACCATGACCGGAAATGAAAAAACATGGCGCAGAG TCCCTTATTTACCTTCATATGTGCCATTTGGACAGCTTTATTTATTGGGAAATTCCTCTGTAGAGTCACTATCAGGTGCAGAGTACTCAAAGTTGACATC GGTATGAGCGTCCTTTCATTGCTTAATCCTCTTCGATATAGTTCCACTCTCTGTTTGGGTTGAGAGTTCATTTTCCTACCTTATATCATACTTAAAGAAT TCAGTAGGTTCTCTCATTTTGTTTGCTTTCTTCTGGCAAAGACATTTTCAGGTCAAATCAGTGATTGCTGAATTGAGGGAAAGATTTCAATCACATTCAA TGAAATCATATCGATCTCGATTTCAGAGAATATATGACTTGTTTATGAGCGACAATGCATCATCCTTCTTAGGGATTGAGCAATGGCAGCAGTTTCCTCA TCTAGAGCAATGGCTTGGCCTTGCAGCTGAGGGGACTGTGGAGCTTGGGCATATAGTAGAGTCTCCTGTTATTCGTACTGCAACTTCAATTGTTCCTCTG GGATGGAATGATGGGCCTGGAGCAAAAAATAGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGCTTGCATCTCTGTACACTTGTTCATGCTCAAGTGA ATGGTAACTGGTGTTCAACTACAGTTGAGTCCTTTCCCTCTGCACCAAACTATTCTTCAAATTATGGAATTCAGCCAGAGTTGCAGAACATGAGAATATT GGTTGGTGCTCCACTAAGAAGCCCACCAAAGCATCAAACTGTTTTAGACTCATCGATTCCTACTTTTACTTCTGTTGATTCCGAGACTGCTAGTAGTTCA GCACTTGTTGACAAGGATAAGTTCATCCGTCCTGAAAGTTTAAATAACTTTCTAATATTCTGCACTAGTGATTTTACAACTGTTTCCAGAGAGGTTCATG TCAGAACCCGTAGAGTACGATTAGTTGGGCTGCAGGGTGCTGGTAAAACCACTCTTTTAAAGGCAATCTTGAATAAATATAAACCAAATATTGCCATCAA TGAGATTGTGGTTTCAGATGTTGATGTACAAGAAGGTATTGCTGATGGTTTGAGTTATTGTGACTCTGAAGGAATAAATATGCAGGAACTGAACATGGAA ACCTCTCGCTTCAGGGATGAACTATGGCATGGAATTCGAGATCTTAGTAGGAAGACAGATTTGATTATACTTGTTCATAACCTATCTCATAGCATACCTC GATATGGCGACTCAAATGGTTCTCAACAAAAGCCAGTCCTTTCACTTTTCTTGGATGAAGCTAAATCTCTTGGAATTCCTTGGGTTCTCGCAATAACGAA CAAATTTTCAGTTAGTGCACACCATCAAAACACAGCAATCGAAGCTGTCCTGAAAGCTTATCAAGCATCTCCCAGCTCAACCGAGGTTATAAATTCCTGT CCATATGTTATGCCTGGTTTTGCTGGGGCTACTCAGTCATGGGATTCAACCAATGAAGATTCTTCTTATGCAAGGATGGGTGCTCAAAGGCTTTTATTGG CTCCTATTAACTTTGTTACAAGGCCTTTCCATAAAAAGGAGATTATTCTTCCAGTAGAAGGTGTCAACTCTCTTTGTCAACAAATTCACCGTGTCCTTCG CAGTCAAGAGGAGTCTTCATTTCAGGAACTTACCAAAGATAGACTAATGATCGAGTTAGCGCGAGAACAAGCAATGTCAATCGATGCGAGTAAAGACGCC CAAGCTAAGGCAGTTTCGTTGAATTCTGCTGCTGTGGGTGCATCTGTTGGGGCTGGTCTTGGCATTGTCATGGCCATTGTAATGGGAGCAGCATCTGCCC TGAGGAAGCCCTAAGGATCCAATTCCTTTCTTATATTATTCGGGTCTGCTTGTAAGTTGAGTTTTGGAAGAGAAGAAAAAGAAGACGGAAACTTCAGAAC CATGTCACAGATATATTTCATGGTTTCCAACTTTCTCTCCCTTCTATTACCTTCCAAAAACCAACTCACGAAAAGACCTTTAGATTTGGGATTGTTTCTA CCCTGTGCTGGAATATTCATTTTTGTAGATAGAAGATTGGAGGAAGTTATCTGAGGGAAAAAAGTTGTTTTGCACTCATTAATTTATTGATTCAATTATT ATTGGTCCTTAAAGTCCTATGTCTCAGGCATTGTCATGCTTGATAGAAATGAAATTGATAGATAGTTGTTTTTGGTCCTAATGGCAGCTGGAAAAATCAG TTAGGGTTTGTAATTTGTTTGTGAGTCGAGTTTTGGAGTGAAATGAATGGAAATGGAAGATTTTGAACTCATTTCACAAGTGTATTTTATGGCTCTTAGG TCTTTTCTTTTCCTTCATTTTCCTTCAAAACTCAATCCGCTAACAGATTCTAAGTG BLAST |
Tissue | pods |
Gene name | LI_gene_152369; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476936
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019465337.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |