| Id Trinity | TRINITY_DN47414_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_475565 |
| Sequence | CTTTTTGTTAAGCAGCAGCACCACGTATATTAACGAAGAAACGATGTGGTCTTCGTCTTCACAATTCATAAACATGTTTTCCTTTTCCCTCCCAACGCCC TTCCATAGCACCAGACTCAGGATGGTGGCTGAAGCTTCTGTTGTTGATGACGCGTTCCCTTCATTTCTTCCCAACCAAGTTCACCGAATCAAAGACCCAT TCGCTCGAAAACTCGCTATGCGTATTCAGAGACTACCCGTAACTGTGGAGATTATGGTCACTCCATAGTGCTTTGTGTAAACCGATTCCATTATCATTTC TTATTGCTCATAAGCTACTCATATGTTCTATATTTTCACATGACCAAATCAGGTTAGTTTCTCTGAAAATCCTATCATGAGTAGCTGTGTGAAGCCATTG ATGCAAGACAAAGCAGCAAATCCAGTTGTCCTTCTACATGGTTTTGACAGTTCATGTTTAGAATGGAGATATACATATCCATTGCTTGAGGAGGCTGGTT TTGAGGCATGGGCCATTGATATTCTTGGCTGGGGTTTCTCTGATTTAGGAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCATTTATACCAGTG AATTGCTTTTATCAACCAGTTTTGGAAGTCTCACATCAAAAGGGCAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCGGTGGCCATAGACTTTGCCATC AATTACCCAGAAGCTGTGGAAAAGCTTGTTCTGATTGATGCTAGTGTATATGCAGAGGGAACAGGAAACCTAGCAACCTTACCTAAGGCAGTAGCATATG CTGGAGTATCTGTATTAAAGAGCATTCCGCTACGCTTGTATGCTAACTACTTGACCTTCAATAACATATCTTTCAGTATCAGCCTTGACTGGACTAATAT AGGCCGCTTGCATTGTTTATTGCCCTGGTGGGAGGATGCTACAGTGGATTTTATGACTAGTGGTGGTTATAATGTTGCTTCCCAGATAAAAAAGGTGAGG CAGAAAACACTCATCATTTGGGGGGAGAATGACCGCATCATCAGCAATAAGCTTGCAGTGCAACTGCACTGTGATTTATCTGATGCAATTATACACCAAA TACCCGATTGTGGTCATCTTCCTCATGTCGAAAGACCGAATTCTGTTGTCAAATTCATTGCTGAATTTGTTAAGAGAGACCAGGGCAGCAAGTGACTATT TTTCAGTAATATGAAGGTTGAGATGACATTCTCTAACAGAGCGGGCAACAAAGCAGTTTACATTTTGGTAAAGGATCCAACAGGGGATAGTGCAAAATAT GTTTTTGGAATGCCTTTCTTCCCTAACCAGAGTTTTGTTTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_152399; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475565
| Blastp | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase from Comamonas with 26.98% of identity |
|---|---|
| Blastx | Uncharacterized hydrolase YugF from Bacillus with 25.28% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001074) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445900.1) |
| Pfam | Alpha/beta hydrolase family (PF12697.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |