Ll_transcript_475544

• Id Trinity: TRINITY_DN47414_c0_g1_i6
• Name Transcript: Ll_transcript_475544
• Sequence: CTTTTTGTTAAGCAGCAGCACCACGTATATTAACGAAGAAACGATGTGGTCTTCGTCTTCACAATTCATAAACATGTTTTCCTTTTCCCTCCCAACGCCC TTCCATAGCACCAGACTCAGGATGGTGGCTGAAGCTTCTGTTGTTGATGACGCGTTCCCTTCATTTCTTCCCAACCAAGTTCACCGAATCAAAGACCCAT TCGCTCGAAAACTCGCTATGCGTATTCAGAGACTACCCGTAACTGTTAGTTTCTCTGAAAATCCTATCATGAGTAGCTGTGTGAAGCCATTGATGCAAGA CAAAGCAGCAAATCCAGTTGTCCTTCTACATGGTTTTGACAGTTCATGTTTAGAATGGAGATATACATATCCATTGCTTGAGGAGGCTGGTTTTGAGGCA TGGGCCATTGATATTCTTGGCTGGGGTTTCTCTGATTTAGGAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCATTTATACCAGTGAATTGCTT TTATCAACCAGTTTTGGAAGTCTCACATCAAAAGGGCAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCGGTGGCCATAGACTTTGCCATCAATTACCC AGAAGCTGTGGAAAAGCTTGTTCTGATTGATGCTAGTGTATATGCAGAGGGAACAGGAAACCTAGCAACCTTACCTAAGGCAGTAGCATATGCTGGAGTA TCTGTATTAAAGAGCATTCCGCTACGCTTGTATGCTAACTACTTGACCTTCAATAACATATCTTTCAGTATCAGCCTTGACTGGACTAATATAGGCCGCT TGCATTGTTTATTGCCCTGGTGGGAGGATGCTACAGTGGATTTTATGACTAGTGGTGGTTATAATGTTGCTTCCCAGATAAAAAAGGTGAGGCAGAAAAC ACTCATCATTTGGGGGGAGAATGACCGCATCATCAGCAATAAGCTTGCAGTGCAACTGCACTGTGATTTATCTGATGCAATTATACACCAAATACCCGAT TGTGGTCATCTTCCTCATGTCGAAAGACCGAATTCTGTTGTCAAATTCATTGCTGAATTTGTTAAGAGAGACCAGGGCAGCAAGTGACTATTTTTCAGTA ATATGAAGGTTGAGATGACATTCTCTAACAGAGCGGGCAACAAAGCAGTTTACATTTTGGTAAAGGATCCAACAGGGGATAGTGCAAAATATGTTTTTGG AATGCCTTTCTTCCCTAACCAGAGTTTTGTTTGAG
• Tissue: pods
• Gene name: LI_gene_152399;
• Additional information: details;

Expression of Ll_transcript_475544

FPKM

• PAB: 0.9
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0
• PW1: 1
• PW2: 0.7
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475544

• Blastp: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase from Comamonas with 26.98% of identity
• Blastx: Uncharacterized hydrolase YugF from Bacillus with 25.28% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001074)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445900.1)
• Pfam: Alpha/beta hydrolase family (PF12697.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;