Ll_transcript_475546

• Id Trinity: TRINITY_DN47414_c0_g1_i8
• Name Transcript: Ll_transcript_475546
• Sequence: CTTTTTGTTAAGCAGCAGCACCACGTATATTAACGAAGAAACGATGTGGTCTTCGTCTTCACAATTCATAAACATGTTTTCCTTTTCCCTCCCAACGCCC TTCCATAGCACCAGACTCAGGATGGTGGCTGAAGCTTCTGTTGTTGATGACGCGTTCCCTTCATTTCTTCCCAACCAAGTTCACCGAATCAAAGACCCAT TCGCTCGAAAACTCGCTATGCGTATTCAGAGACTACCCGTAACTGTTAGTTTCTCTGAAAATCCTATCATGAGTAGCTGTGTGAAGCCATTGATGCAAGA CAAAGCAGCAAATCCAGTTGTCCTTCTACATGGTTTTGACAGTTCATGTTTAGAATGGAGATATACATATCCATTGCTTGAGGAGGCTGGTTTTGAGGCA TGGGCCATTGATATTCTTGGCTGGGGTTTCTCTGATTTAGGAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCATTTATACCAGTTTTGGAAGT CTCACATCAAAAGGGCAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCGGTGGCCATAGACTTTGCCATCAATTACCCAGAAGCTGTGGAAAAGCTTGT TCTGATTGATGCTAGTGTATATGCAGAGGGAACAGGAAACCTAGCAACCTTACCTAAGGCAGTAGCATATGCTGGAGTATCTGTATTAAAGAGCATTCCG CTACGCTTGTATGCTAACTACTTGACCTTCAATAACATATCTTTCAGTATCAGCCTTGACTGGACTAATATAGGCCGCTTGCATTGTTTATTGCCCTGGT GGGAGGATGCTACAGTGGATTTTATGACTAGTGGTGGTTATAATGTTGCTTCCCAGATAAAAAAGGTATTTGCAGCATTACAAGTTGTTCAGTGTTGGTA TGAGTTATATTTTATTTTTATGGCATTTGGACAATATTTACTCTTTTAAGATATAGGAAAAAGCTCCTGTGAAGTGAAGTAATCTTGCATGTAATGAGTA AAGATGTATCTGCCCTTGATTTAATCCTTAGTTCTTAATCGACTAATGATTTGAGGGTGGATATGGGCTCACTCACTTTATACATAAGATCACCTTAAAG GAGCCTTATACTAACATAATCACTCATTATGCCTATAAAGCATTTACATTCTTATAATTCCATGAGGTATTGTGAGTGTTCATATGATTTCCCCTGCCAC CCAAAGAAAAATGTTGCTCTTTTGTCCTCTCTTATATCTAAATTTCTCTCTTATGTACTCTTCACTACACACTTAGCATATTTGAGACCATTGGATTGAA GGTGCTACACACAGCTTCCTTTGAGTGTTGTTATCACTTATCATCTTTCGTGTACTGTTAATGATGCATGTTGAACTCTCTTGATTGCTAACTTTTTCTG CAGGTGCAATCTTCCTTGGTAACTTTTATCTGTATTTTTTACTAAAACGGTTTTGGTGCAGGTTTATCTCACATCAGACCAAAACATAGCCATTATTTTT GCTAGGAGAACAACTCAGTTTTTCCTTTCTTTCTTTTTGTCATTCTTTTTAATCTTAACATAGCCTTTATTTTTCGCAGGTGAGGCAGAAAACACTCATC ATTTGGGGGGAGAATGACCGCATCATCAGCAATAAGCTTGCAGTGCAACTGCACTGTGATTTATCTGATGCAATTATACACCAAATACCCGATTGTGGTC ATCTTCCTCATGTCGAAAGACCGAATTCTGTTGTCAAATTCATTGCTGAATTTGTTAAGAGAGACCAGGGCAGCAAGTGACTATTTTTCAGTAATATGAA GGTTGAGATGACATTCTCTAACAGAGCGGGCAACAAAGCAGTTTACATTTTGGTAAAGGATCCAACAGGGGATAGTGCAAAATATGTTTTTGGAATGCCT TTCTTCCCTAACCAGAGTTTTGTTTGAGTGCACAGATATTCTTCCTTGATAACACTATTTATCAGTACTTCCATCATGATTTTGTTCAGATTGTGGATTG CAGTAAGCCAATTATATTAATCATTGATTTCAAGAGATTATTATTTTAGTTTCTGAAATTGTAAGCACCGTATGTGGATCAAAATCATTTGAAATAAAAT ACATATTTTTCTTCCAAATGATTTTAGAGAAGAAAACAAGGCTAAGGTATTGATTTAGTCTTTTATCTTATTATTGACTAAAGATGAGATAAAAGACCAA AACACCGTTCTACCCATAAAATTCTGATTTACTTTTTAAGGATAGCCCACAGGTTGGAAAACATATGAAATCATTCTACTTTGTAAGCATGAATGGAGGC ATGTTATTCTATTTAGAATTCTACTCAGTATCTTACTGTATTATTATCTGCCTTTTTGCATGAAAAAACATAATTAAGTGGATAAAATCTCCCTAATTTA GTGATGTTAAGACTTGAATCTTGTTTGATTAAGTTTTGAAGTTACATAAAATGCA
• Tissue: pods
• Gene name: LI_gene_152399;
• Additional information: details;

Expression of Ll_transcript_475546

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475546

• Blastp: Abhydrolase domain-containing protein cgi-58 from Caenorhabditis with 28.93% of identity
• Blastx: Uncharacterized hydrolase YugF from Bacillus with 36.07% of identity
• Eggnog: alpha/beta hydrolase fold(ENOG4112C3B)
• Kegg: Link to kegg annotations (CELE_C37H5.2)
• CantataDB: Link to cantataDB annotations (CNT0001074)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445900.1)
• Pfam: alpha/beta hydrolase fold (PF00561.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;