Ll_transcript_475518

• Id Trinity: TRINITY_DN47422_c1_g1_i3
• Name Transcript: Ll_transcript_475518
• Sequence: ATCACCATCTTCGCACGGAACTCAAATTACAGCTAGAAGTATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAGTATGGAGCTTCATTTCAGCA ACAAGAAGTTGCCATGGAGGCCCTTGTTGACTTTTGCAGGCAACAAACGTTCACAGTGGAGATGTATGCTAACTTTGACTGTGACTTAACATGCAATAAT GTATTCGAAGACATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACACTCCACTTTCTTCCATGCATGTTCTTGCTTTGGATGGTCTTATTGCTG TCATGCAAGGAATAGCTGAAAGATTAGGCAATGGATCTTTATGTTCACAAAACTTTGCTGTGAATCTTGAAGAATATACTCCATTCTGGCAGGAAAAGTG TGAAAATTTCCGGGATCCAAATAATTGGGTTCCTTTTGTTTGCCGAAGAAAGTGCTTCAAGAAAAGATTGATGATTGGAGCCGATCATTTTAACCAGGAT ATTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTCTTACCTGACAAACTTGATCCCCAAAGTATTGCATGTTTTTTCAGATACACTCCTGGGCTGG ATAAGAACCTCATTGGTGATTACCTAGGAAACCATGATGAATTTTGTGTTCAGGTTCTTCATGAATTCGCTAGAACATTTGATTTCAAAGACATGACATT AGACAATGCCCTGCGACTATTTTTGGAGACTTTCAGACTTCCTGGAGAATCACAGAAGATACAAAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAA CAATTGCCAGATATCCTTGCTAACAAGGATGCTGCTCTCTTGTTATCATACTCTATTATAATGCTTAATACAGATCGTCACAATGCACAGGTCAAAAAGA AGATGACAGAAGAGGATTTTATCCGAAATAATAGGCGAATAAATGGTGGCAATGATCTACCTAGAGATTACCTGTCAGAACTTTACCATTCAATTTGTAA GAATGAAATCCGCACGACCCCTGAACCAGGTTTCGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGATGTACAAGTTGAAGAAAACTACTCCA TTCATTGTATCTGATTCCAGGGCCCACCTTGATTATGATATGTTTGTTATATTGTCAGGCCCAACAATTGCTGCCATCTCTGTTGTATTTGATAATGCTG AAAATGAAGAGGTATGCCAAATATGTTTTGATGGGTTCTTTGCTGTTGCAAAGATATCAGCTTACTATCATCTTGAAAATGTACTCAATGATCTGGTTGC GTGTCTCTGTAAGTTCATCACCATTTTGGATCCATTACCAGCTGATGAATCTATCATTGCCTTTGGTGAAGACACAAAAGCAAGAATGGCAACTGAGACA GTTTTCACTATTGCAAATAGCTATGGTGATTACATCTGCACAGGGTGGAGGAATATTCTTGATTGCATCTTAAGGCTCCACAAGTTAGGCCTTCTTCCTA CTCGTTTGGCCAGTGAAGTTGTTGATGAGTTAGATATTTCTACAGAAAATGGACGCGAGAAGCACAATTTGAGTTCGTTCTCATTAAGTCGTCCTCCATC TATTAGTACTCCAAAGAGATCCTCAGGGTTGATGAGCAGGTTCAGTCAACTTTTATATTTTGGCACTGAAGAGGCAAGATCAATACCAACTGAAGAACAA CTTGTTGCTCATCAGCAAGCCATGGAAACAATTCAGAAGTGTCACATTGGCAACATATTTACTGAGAGTAAATTTCTACAAGCTGGATCTCTAATGCAGC TTGCGAGAGCACTCATTAATGCTGGAGTGCGACCTCCTAACGGGAACATCATACATGAGGATGAAGAAACTTCAGTTTTCTGCCTGGACTTACTGATAGC AATCACTCTAAATAACAGGGATAGAATTGGACTTCTTTGGAACGGTGTTTATGAGCACATATCCAATATTGTTCAGTCAACTGTGATGCCCTGTCCCCTG GTAGAAAGGGCTGTTTTTGGACTTCTAAGGATTTGCCATCGCTTGCTTCCCTACAAAGAGAACATAGCTGATGAACTTTTGAAGTCTTTGCAACTTCTCT TGAAGCTTGATGCACATGTTGCAGATGCATACTATGAGCAGATTACACAGGAAGTTAGTCGCCTTGTGAAGGCAAATGCTTCTCATATAAGATCTCAGTT AGGATGGCGGACAATTACATCACTGCTTTCCATCACTGCTAGACCCC
• Tissue: pods
• Gene name: LI_gene_152465;
• Additional information: details;

Expression of Ll_transcript_475518

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.3
• PS2: 0
• PS3: 0.8
• PW1: 0.5
• PW2: 0.8
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475518

• Blastp: ARF guanine-nucleotide exchange factor GNOM from Arabidopsis with 75.07% of identity
• Blastx: ARF guanine-nucleotide exchange factor GNOM from Arabidopsis with 75.64% of identity
• Eggnog: and Sec7 domain(COG5307)
• Kegg: Link to kegg annotations (AT1G13980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419558.1)
• Pfam: Sec7 domain (PF01369.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;