Ll_transcript_476466

• Id Trinity: TRINITY_DN47424_c0_g1_i11
• Name Transcript: Ll_transcript_476466
• Sequence: GAAAATGCCACTTGATAGGTATATACAAAGATCCCGTTGCAAAATTGAATTGGCCCGATTCGAAATCCAAAGATAGTTGATGCGTTTTAGGTTTTTGGTT CACAAATTTTTCTAAATTCCATGGATGGCAACAATTTATCTTCCGATCAAGTCATTGCAGAAATGCTTGATATGGGTTTTGAGCATTCGAACATTGTTGA AGCCATAAAAGTTGTGGGCCCATCCATTACCAGTGTTGTTGATCATATCTTGAATGGTGCTAGTGTTGTAAGTAGAACTAACTGTGAAGCATCATCATCC ACTAGTACTGCTATCAAGTCTAAAGTTCATGCAAATAATGGGGAAGTTTTGAAAAAGAGAACTTTGCTGCCGTCCGGTCAAGTTCGACAATCGAGGATAC TCGATCATTTCCAACCCACCAATGGTAAAGTCAAAGAGAGCACGAAGAGTCATGTAGCTGTTGATGCAGTTGGCAATGTGGAAGAGCATAAGGAGCCTTT CTCCGAAGTGGTTGTTGATCCCTGTGTGATGTCGGGGTCAGTTGTAGCGGATTCTGAGGATGATTTGGATATTACATATGATTGGGAGAAGAAAGCTGGA ACTATCTTACAAAAGCATTTTGGTTTTTCATCATTGAAGAGTTTTCAAAAGAAGGCCTTGAATGCTTGGTTTGCACATAAAGACTGTCTTGTCCTGGCTG CAACAGGATCTGGGAAATCTCTATGCTTTCAGCTTCCTGCATTACTAACCGGGAAAGTGGTGGTTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCA GTGCTTAAAGCTAGCAAGACATGGAATCAGTGCTTGCTTTCTCGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCTATGAAAGGCATGTATAGT ATAATTTATGTTTGCCCGGAGACCATCCTGAGATTGATTACACCACTGCAGGAGCTTGCAGAAAGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTAC ATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTACAGGTCTGTTTTATCCTTTCTATTTCCTCATATTTTATGGTTACTGAAAATGAAATGGAT CAGTTAGTGCACATAGAACATCTTAAACAATCACTACTTGTGGTTTGTATGCGAAAGAAACTAATAAGACAAACTGTTGGTTGATTCTATTGACTATCAC ATGTATCACCTCTGTTCTTTGTTTAGTCTTTAGCGGATACTTCACAATTTTGTAAAGGTCTTCATTCAACTGTCATAAGTATGACCTGTTTTTAAACGTC TTCTCTTGTTTCAGCCGTCTGTCTATGCTGAGGGAAAAATTTAATACCAGCAAGATGAAGTCCCTGAAATTTGATATACCTCTGATGGCCTTGACTGCCA CAGCTACAAAGAAAGTTCGAGAAGATATTTTGAAGTCATTGTGCTTGTCAAAAGATACTAATGTTGTACTCACCTCATTTTTTCGATCTAATTTACGCTT CACGGTGAGTTTGTTGATTATAACTCGTATACTTATCTCTGACTATACCATCTTGCAGTTACTCTCTTTAAATATTTACTGTGGCTTCATACAGGTAAAG CATACTAGATTGTCACAGGCTTCGTATGACAAAGATTTTCATGAATTGGTTGAAATATATGGTAGAAAGCAATATACTGATGAAAATAAAAGAGGTCTCA TCTCAAAGGATTCAGATAATGTTTCCAACTCTGACACAGACGGTGATTCTCCTTATAATAAGGATGACAACGAAGACGACTATGCTGATAGAGATATTAA TGTAATAGACTCAGGAAACAGGGAAAATATTAGAAAGGGTAAAGAATTGTCAGTTGAGTTCCTTGAAAATGACATTGATGACTTTCAAAGTGTTGATGAC TGGGATGTTACCTGCGGTGAATTTTGTGCACAGCCTCCTCCCAATGAATGGGAGTCATCTGAGATAATTAATCCACCCAAGAAACCAGGAGGAAGACTTA GAATTCTTAAAGAACCTGTGCAAAAAGGACCGACAATCATATATGTACCCACCAGAAAAGAAACAGTGAAAATTGCAAATTATCTATGCAAGTTTGGCGT GAAGGCTGCGGCTTATAATGCAGGGCTTCCAAAATCACATCTTAGAAGGGTTCATAAGGAGTTTCATCAAAATAATTTAGAGGCTGTTGTTGCAACAATT GCATTTGGAATGGGAATTGACAAACCGAATGTTAGAAGAATCATCCACTATGGTTGGCCGCAGAGTTTGGAAGCCTACTACCAAGAAGCTGGCCGGGCTG GTCGAGATGGAAAATTAGCTGATTGCATTCTATACACAAACCTAGCAAGAATGCCATCACTTTTGCCAAGTAGAAGAAGTGAAGATCAAACAAAACAAGC ATATATCATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCATGCTGTCGAGCTAAGATACTTGTCGAGTACTTTGGAGAGAATTTTGGTTCTCAG AAGTGTCAGTTATGTGATGTGTGTGTTGATGGACCGCCTGAAAGGCAGAATTTGAAAGAGGAGGCGAGTATTTTACTACAAACTATAGCTGCCGAATATG CACGCAACTATTCCATGGGTGACCCATATGATGACAGTATACATTTTGATTTGGAAGATAGAAGAAGATTTGGAGAGAGATCAAATCTTACGATGTTTGT TGGAAAGATAAATGAGCAGTCTCCAAAGTTTTTAACCACTGCTATATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATACATTAGGGAG GGAGATGAGAAG
• Tissue: pods
• Gene name: LI_gene_152475;
• Additional information: details;

Expression of Ll_transcript_476466

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476466

• Blastp: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 52.3% of identity
• Blastx: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 52.17% of identity
• Eggnog: atp-dependent dna helicase(COG0514)
• Kegg: Link to kegg annotations (AT5G27680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452260.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;