Ll_transcript_476471

• Id Trinity: TRINITY_DN47424_c0_g1_i16
• Name Transcript: Ll_transcript_476471
• Sequence: GAAAATGCCACTTGATAGGTATATACAAAGATCCCGTTGCAAAATTGAATTGGCCCGATTCGAAATCCAAAGATAGTTGATGCGTTTTAGGTTTTTGGTT CACAAATTTTTCTAAATTCCATGGATGGCAACAATTTATCTTCCGATCAAGTCATTGCAGAAATGCTTGATATGGGTTTTGAGCATTCGAACATTGTTGA AGCCATAAAAGTTGTGGGCCCATCCATTACCAGTGTTGTTGATCATATCTTGAATGGTGCTAGTGTTGTAAGTAGAACTAACTGTGAAGCATCATCATCC ACTAGTACTGCTATCAAGTCTAAAGTTCATGCAAATAATGGGGAAGTTTTGAAAAAGAGAACTTTGCTGCCGTCCGGTCAAGTTCGACAATCGAGGATAC TCGATCATTTCCAACCCACCAATGGTAAAGTCAAAGAGAGCACGAAGAGTCATGTAGCTGTTGATGCAGTTGGCAATGTGGAAGAGCATAAGGAGCCTTT CTCCGAAGTGGTTGTTGATCCCTGTGTGATGTCGGGGTCAGTTGTAGCGGATTCTGAGGATGATTTGGATATTACATATGATTGGGAGAAGAAAGCTGGA ACTATCTTACAAAAGCATTTTGGTTTTTCATCATTGAAGAGTTTTCAAAAGAAGGCCTTGAATGCTTGGTTTGCACATAAAGACTGTCTTGTCCTGGCTG CAACAGGATCTGGGAAATCTCTATGCTTTCAGCTTCCTGCATTACTAACCGGGAAAGTGGTGGTTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCA GTGCTTAAAGCTAGCAAGACATGGAATCAGTGCTTGCTTTCTCGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCTATGAAAGGCATGTATAGT ATAATTTATGTTTGCCCGGAGACCATCCTGAGATTGATTACACCACTGCAGGAGCTTGCAGAAAGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTAC ATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTACAGCCGTCTGTCTATGCTGAGGGAAAAATTTAATACCAGCAAGATGAAGTCCCTGAAATT TGATATACCTCTGATGGCCTTGACTGCCACAGCTACAAAGAAAGTTCGAGAAGATATTTTGAAGTCATTGTGCTTGTCAAAAGATACTAATGTTGTACTC ACCTCATTTTTTCGATCTAATTTACGCTTCACGGTAAAGCATACTAGATTGTCACAGGCTTCGTATGACAAAGATTTTCATGAATTGGTTGAAATATATG GTAGAAAGCAATATACTGATGAAAATAAAAGAGGTCTCATCTCAAAGGATTCAGATAATGTTTCCAACTCTGACACAGACGGTGATTCTCCTTATAATAA GGATGACAACGAAGACGACTATGCTGATAGAGATATTAATGTAATAGACTCAGGAAACAGGGAAAATATTAGAAAGGGTAAAGAATTGTCAGTTGAGTTC CTTGAAAATGACATTGATGACTTTCAAAGTGTTGATGACTGGGATGTTACCTGCGGTGAATTTTGTGCACAGCCTCCTCCCAATGAATGGGAGTCATCTG AGATAATTAATCCACCCAAGAAACCAGGAGGAAGACTTAGAATTCTTAAAGAACCTGTGCAAAAAGGACCGACAATCATATATGTACCCACCAGAAAAGA AACAGTGAAAATTGCAAATTATCTATGCAAGTTTGGCGTGAAGGCTGCGGCTTATAATGCAGGGCTTCCAAAATCACATCTTAGAAGGGTTCATAAGGAG TTTCATCAAAATAATTTAGAGGCTGTTGTTGCAACAATTGCATTTGGAATGGGAATTGACAAACCGAATGTTAGAAGAATCATCCACTATGGTTGGCCGC AGAGTTTGGAAGCCTACTACCAAGAAGCTGGCCGGGCTGGTCGAGATGGAAAATTAGCTGATTGCATTCTATACACAAACCTAGCAAGAATGCCATCACT TTTGCCAAGTAGAAGAAGTGAAGATCAAACAAAACAAGCATATATCATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCATGCTGTCGAGCTAAG ATACTTGTCGAGTACTTTGGAGAGAATTTTGGTTCTCAGAAGTGTCAGTTATGTGATGTGTGTGTTGATGGACCGCCTGAAAGGCAGAATTTGAAAGAGG AGGCGAGTATTTTACTACAAACTATAGCTGCCGAATATGTAAGTTGAATGCTTCCGATTTTATACTGAAAAAACTTATTAATTCTGTTATACATGTGAAT TTATATTAACATTTTGACTCTGGATTGTCGCAGCATATTTTAGATATGTGTGCCTCATTCTCCTCCATGTGTATTCTGCACGTGTCTATTTCTCTAGATT AGACTTCAATATGATAAATTGGTTAACCAAATGCATTGTTTTGTGGAGTTTCTGGATCAACTGTAGTCTTAAGAGCTCAAGTTCTATCCAACCTATACCC TGGCTCTGAAGCATGATAAATGTGAAACAGTCATGCTCCTATGATTGTACTTTCGACATTCTGTAAGACGAAAGAAACTAATGCAACATGGATGTTGGTT TTTCAGGCACGCAACTATTCCATGGGTGACCCATATGATGACAGTATACATTTTGATTTGGAAGATAGAAGAAGATTTGGAGAGAGATCAAATCTTACGA TGTTTGTTGGAAAGATAAATGAGCAGTCTCCAAAGTTTTTAACCACTGCTATATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATACAT TAGGGAGGGAGATGAGAAGACCCATGTTCAGATAAAATACCCGGAGCCAACAAAATTAGGATTGGAATTTGTGAAGTCAGGAAGTGAACAAGATTTCTAT GTTTGCCCAGAGGCAGATATGTTGCTTGCAAAGGAAACTGCTAATAAGCCATATTCCTCATTCTCAGAATGGAAAACAGGTTGGGCTGATCCTGAGATCC GCCGGCAGCGTCTGGAAAGAATGCAACTCAAAAAGACAACAAAGTTTCGCAGACCGAAAAAGAAACGAAAGAGGAACGCTGATAAACTGCGACCTGATCT GAGGACTTCACGAGGTAGACTGTCAGCAAAACTTGCAAAAAATAAGTGATATGTCAAGGTCATCTTATTTAGTTATTCAGACACGTCATTTAACTCACAA GTATAAGTGAATTGATCCATTGTAATCTCAATTTTGTCAAGAATAATTGTCAAGTTTTGACAGACAACATGGTTTTCATTCAATGACATTGTACCTAAAT CAGGAAAATGATAAGGTATATTTTTGTTATTGATTTAATAGTAATGAGTAATGACTAATGAGTTACTTTTGTGATAATGATAAAATACCATTACATTGCA GCTAAAGCTTGCTTCTCAATTCGTCATTGACTTGCTCTAAATTTGTTTCAAGGGTGCAGAAGTAAAATGTTTATGAATGCACATTGAATATTCTGTTGTA ACATCTAA
• Tissue: pods
• Gene name: LI_gene_152475;
• Additional information: details;

Expression of Ll_transcript_476471

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.7
• PS3: 0.7
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476471

• Blastp: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 56.4% of identity
• Blastx: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 56.26% of identity
• Eggnog: atp-dependent dna helicase(COG0514)
• Kegg: Link to kegg annotations (AT5G27680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452258.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;