Ll_transcript_476457

• Id Trinity: TRINITY_DN47424_c0_g1_i2
• Name Transcript: Ll_transcript_476457
• Sequence: GAAAATGCCACTTGATAGGTATATACAAAGATCCCGTTGCAAAATTGAATTGGCCCGATTCGAAATCCAAAGATAGTTGATGCGTTTTAGGTTTTTGGTT CACAAATTTTTCTAAATTCCATGGATGGCAACAATTTATCTTCCGATCAAGTCATTGCAGAAATGCTTGATATGGGTTTTGAGCATTCGAACATTGTTGA AGCCATAAAAGTTGTGGGCCCATCCATTACCAGTGTTGTTGATCATATCTTGAATGGTGCTAGTGTTGTAAGTAGAACTAACTGTGAAGCATCATCATCC ACTAGTACTGCTATCAAGTCTAAAGTTCATGCAAATAATGGGGAAGTTTTGAAAAAGAGAACTTTGCTGCCGTCCGGTCAAGTTCGACAATCGAGGATAC TCGATCATTTCCAACCCACCAATGGTAAAGTCAAAGAGAGCACGAAGAGTCATGTAGCTGTTGATGCAGTTGGCAATGTGGAAGAGCATAAGGAGCCTTT CTCCGAAGTGGTTGTTGATCCCTGTGTGATGTCGGGGTCAGTTGTAGCGGATTCTGAGGATGATTTGGATATTACATATGATTGGGAGAAGAAAGCTGGA ACTATCTTACAAAAGCATTTTGGTTTTTCATCATTGAAGAGTTTTCAAAAGAAGGCCTTGAATGCTTGGTTTGCACATAAAGACTGTCTTGTCCTGGCTG CAACAGGATCTGGGAAATCTCTATGCTTTCAGCTTCCTGCATTACTAACCGGGAAAGTGGTGGTTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCA GTGCTTAAAGCTAGCAAGACATGGAATCAGTGCTTGCTTTCTCGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCTATGAAAGGCATGTATAGT ATAATTTATGTTTGCCCGGAGACCATCCTGAGATTGATTACACCACTGCAGGAGCTTGCAGAAAGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTAC ATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTACAGCCGTCTGTCTATGCTGAGGGAAAAATTTAATACCAGCAAGATGAAGTCCCTGAAATT TGATATACCTCTGATGGCCTTGACTGCCACAGCTACAAAGAAAGTTCGAGAAGATATTTTGAAGTCATTGTGCTTGTCAAAAGATACTAATGTTGTACTC ACCTCATTTTTTCGATCTAATTTACGCTTCACGGTAAAGCATACTAGATTGTCACAGGCTTCGTATGACAAAGATTTTCATGAATTGGTTGAAATATATG GTAGAAAGCAATATACTGATGAAAATAAAAGAGGTCTCATCTCAAAGGATTCAGATAATGTTTCCAACTCTGACACAGACGGTGATTCTCCTTATAATAA GGATGACAACGAAGACGACTATGCTGATAGAGATATTAATGTAATAGACTCAGGAAACAGGGAAAATATTAGAAAGGGTAAAGAATTGTCAGTTGAGTTC CTTGAAAATGACATTGATGACTTTCAAAGTGTTGATGACTGGGATGTTACCTGCGGTGAATTTTGTGCACAGCCTCCTCCCAATGAATGGGAGTCATCTG AGATAATTAATCCACCCAAGAAACCAGGAGGAAGACTTAGAATTCTTAAAGAACCTGTGCAAAAAGGACCGACAATCATATATGTACCCACCAGAAAAGA AACAGTGAAAATTGCAAATTATCTATGCAAGTTTGGCGTGAAGGCTGCGGCTTATAATGCAGGGCTTCCAAAATCACATCTTAGAAGGGTTCATAAGGAG TTTCATCAAAATAATTTAGAGGCTGTTGTTGCAACAATTGCATTTGGAATGGGAATTGACAAACCGAATGTTAGAAGAATCATCCACTATGGTTGGCCGC AGAGTTTGGAAGCCTACTACCAAGAAGCTGGCCGGGCTGGTCGAGATGGAAAATTAGCTGATTGCATTCTATACACAAACCTAGCAAGAATGCCATCACT TTTGCCAAGTAGAAGAAGTGAAGATCAAACAAAACAAGCATATATCATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCATGCTGTCGAGCTAAG ATACTTGTCGAGTACTTTGGAGAGAATTTTGGTTCTCAGAAGTGTCAGTTATGTGATGTGTGTGTTGATGGACCGCCTGAAAGGCAGAATTTGAAAGAGG AGGCGAGTATTTTACTACAAACTATAGCTGCCGAATATGCACGCAACTATTCCATGGGTGACCCATATGATGACAGTATACATTTTGATTTGGAAGATAG AAGAAGATTTGGAGAGAGATCAAATCTTACGATGTTTGTTGGAAAGATAAATGAGCAGTCTCCAAAGTTTTTAACCACTGCTATATTATGGTGGAGAGGT CTTGCTCGAATTTTGGAAGTTAAAGGATACATTAGGGAGGGAGATGAGAAGACCCATGTTCAGATAAAATACCCGGAGCCAACAAAATTAGGATTGGAAT TTGTGAAGTCAGGAAGTGAACAAGATTTCTATGTTTGCCCAGAGGCAGATATGTTGCTTGCAAAGGAAACTGCTAATAAGCCATATTCCTCATTCTCAGA ATGGAAAACAGGTTGGGCTGATCCTGAGATCCGCCGGCAGCGTCTGGAAAGAATGCAACTCAAAAAGACAACAAAGTTTCGCAGACCGAAAAAGAAACGA AAGAGGAACGCTGATAAACTGCGACCTGATCTGAGGACTTCACGAGGTAGACTGTCAGCAAAACTTGCAAAAAATAAGTGATATGTCAAGGTCATCTTAT TTAGTTATTCAGACACGTCATTTAACTCACAAGTATAAGTGAATTGATCCATTGTAATCTCAATTTTGTCAAGAATAATTGTCAAGTTTTGACAGACAAC ATGGTTTTCATTCAATGACATTGTACCTAAATCAGGAAAATGATAAGGTATATTTTTGTTATTGATTTAATAGTAATGAGTAATGACTAATGAGTTACTT TTGTGATAATGATAAAATACCATTACATTGCAGCTAAAGCTTGCTTCTCAATTCGTCATTGACTTGCTCTAAATTTGTTTCAAGGGTGCAGAAGTAAAAT GTTTATGAATGCACATTGAATATTCTGTTGTAACATCTAA
• Tissue: pods
• Gene name: LI_gene_152475;
• Additional information: details;

Expression of Ll_transcript_476457

FPKM

• PAB: 0.4
• PNAB: 3.7
• PS1: 4.3
• PS2: 2.8
• PS3: 4.7
• PW1: 3.3
• PW2: 2.7
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476457

• Blastp: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 53.96% of identity
• Blastx: ATP-dependent DNA helicase Q-like SIM from Arabidopsis with 53.85% of identity
• Eggnog: atp-dependent dna helicase(COG0514)
• Kegg: Link to kegg annotations (AT5G27680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452260.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;