| Id Trinity | TRINITY_DN47425_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_476695 |
| Sequence | CTTTCTCTTCTGGTTTCTATATTATTCATTCAAATACTCTTTCTCTTCTGGTTTCTATATTATTCATTCAAATACTCTTTCTCTTCTGGTTTCTATATTC CTCTCTTTCTCCATTCATTCAAATAACAATTCTCATTTCCATGGAAGACTATTCCTCTCTTTCTCCATTCGTATGTGATGGAAAGGGATGGAAACTGTGC TTTGAAGACTTTGTTTCAGGCTTAGGAGTGAACATAGTGACTATTGTTATGATTATTGTGATTGGATTTCATCACAACATTGGTAGAGGACAACCACAAC CACTTCCGAGATCACATGCCCAGAGGACCCTTCTGGACAAATTCTTCCTCGACCTTCTACCAGCCATCGGAGCATGTCTTTCGGTCTCACCCATAATTTT TCTGTGGAACAAACAACATAATACTCATTTTGTTGGATATAGCATGTGCTTTTATACCTCTTCTGAGTTCATCATATGGACAAATATCATTCTCTTCTCA AAATACTCCACCACTCATTCTGCACTCTTCAACCATGTATTATGCTATTGGTGGATCCTCAAATCAATATCAGCAGTCTACCATTTAATCATAAAGTTTC CATCACTTGAGGTTTCAATATGCATAATAGAAAGCTTAGTTGTTCTGGTGAATATCACATTTGGCATAGCTATCAATATAATCAGGACAAAGATACAATC TTCCAGAAGCAGCCCAATGGAAGATCCACTTGTTCCCAATAGTGTGGACCTTGAGGAAGGTAGCCATAGTGACCTTGGAAATAATGAGAAGTTTTGGGAT TTGATGACTTTCAAATTCATAACTCCAGTAATGAATCATGGTGTGGTAAAACAATTAGACTCTGAAGATCTGCTGCAGCTACCTACTGACATGGGACCTT CTTCCTGTCATGGCCTAATTTCGTCCTGCTGGAAAGCTCAGTTGAGTAGTAATGTTTCAAACCCATCCTTATTTAGAGCACTTTGTAGTGCATATGGATG GCCATATCTCCGCCTGGGTTTATTGAAGATGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAACAAGCTTATCAAGTCTCTTCAACAAGGT TCGGTGAGTGTGGATGGGTACTTACTTGCAATGTCTATGGGTCTCACCTCTATAATTAAATCCTTTTTAGATACGCAATATACTTTTCATCTTTCCAAAC TGAAGCTAAAGCTGCGATCTAGTATCATGACTCTAATCTATGAGAAGTGTCTATGTGTGAACCTAGCGGAGCGTTCAAAATTCACAAATGGAGAAATTCA GACATTCATGTCAGTAGATGCTGACCGAACTGTCAACTTGTGTAATAGTTTCCATGATCTGTGGAGCTTGCCTTTACAAATAGGAGTGGCGCTTTATCTT CTGTATACTCAAGTCAAATTTGCATTTTTATCTGGATTAGCCATAACCATTCTATTGATTCCAGTAAATAAATGGATATCAAAATTGATTGCAAGGGCCA CGGAGCAAATGATGAAGGAGAAGGATGAAAGGGTTCGTAGGACCGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAACTACTTTT TTCTAGTTGGTTGATGGAGACAAGATCATTGGAAGTGAAACATCTATCTACTAGGAAATACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACACCA ACACTCTTTTCTCTTTGTACATTTGGACTCTTTGCATTGTTGGGACATCAGCTTGATGCTGCCATGGTTTTTACTTGTCTTGCTTTGTTTAACACACTGA TTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCTGTTATATCCTCTAGACGGCTGAGTAGGTTTCTCTCTTGTCCTGAACATAA AGTGGGAGAGGCCAGTTACTGTTCATTCACGTTCCCAAGTAAGCAGCCTGATTCTGTACAAGATTCGGCTGTCAGTTTCGAAGATGCATGCTGTACTTGG TCAAGCGCTGATGAACGAACATTAAATTTGGTGTTGAATCATGTGACACTAAGCCTCTCCAAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCAG GTAAGTCATCCCTGTTATATTCAGTTCTTGGAGAAATGCGGCTTGCTCATGGGTCTGTTTATTCCAATGGATCCATAGCTTATGTACCACAGGTTCCCTG GATTTTATCTGGAACTATTCGTGACAACATATTATTTGGGAAAGGCTATGATCCTGAAAGGTATGCAGATACATTGCAAGCATGTGCGTTAGATGTTGAT ATCTCATTGATGGTTGGAGGTGACATGGCTTATATTGGCGAGAAGGGAGTGAACTTATCGGGTGGGCAGAGAGCTCGTCTTGCTTTGGCAAGGGCAATGT ATCATGGCTCAGATGTTATTATGCTTGACGATGTCCTGAGTGCAGTAGATGTACAAGTTGCTCAATGGATCTTACACAATGCCATTTTAGGTCCTCTCAT GCGGGGGAAAACACGATTGCTATGTACCCACAACATTCAGACAATATCTTCTGCTGATATGGTTGTTGTAATGGATAAAGGACATGTAAAGTGGATGGGA AGTTCAGCTGAATTTCCGATTTCTTCATATACAGCATTGTCCCCATTGAATGAAATGGATTCATCTTTACAGAATCACACACAATCTTTAAACACAAATT TGTCTTCCAAATCCAAGGAGCAACCTCTTCCCGATAAAGTAATTATGCATGCTCTGGATGGGCCAGAGGACGTAATTGAAGTTGAGTCAAGGAAAGAGGG TAAAGTCGAACTTGGAGTGTATAAGAACTATGCTGTCTTCACTGGCTGGGTCACCACAGTTATTATATGTCTGTCAGCTATTTTGATGCAAGCTACTCGT AATGGAAATGATTTATGGCTGTCATATTGGGTTGATTCGACAACAGAAGGCAGCCAAACAAAATACTCTGTGTCCTTCTATCTGGGTATACTTTCTCTCT TATGCATTATGAATTCCTTTTTCACACTGGTGAGAGCGTTCTCTTTTGCATTTGGGGGCATACAAGCAGCAACTAAGGTACACAATAGACTTCTCAGCAA GCTCGTCAATGCACCTGTCCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTGTCTTCGGATCTTTACACAATTGATGACTCTCTTCCG TTCATCTTGAACATTCTCCTAGCTAATTTTGTAGGGCTGTTGGGTATTGCAATAATATTGTCATACGTGCAGGTCCTCTTCTTAGTCCTGCTATTACCAT TTTGGTATATCTACAGTAAGCTCCAGTTTTTCTACAGGTCAACATCGAGAGAATTACGACGACTGGATAGTGTTTCTCGTTCTCCAATATATACATCTTT CACTGAAACACTTGATGGATCATCAACTATTAGGGCATTTAAATCTGAGGACTTTTTCTTTGCCAAATTCACTGAACACATAACATTGTATCAGAAGACT TCCTACACAGAGACAGTGGCAAGTTTATGGCTTTCCTTGCGTCTCCAGTTATTAGCTGCATTTATCGTCTCATTCATAGCTCTGATGGCTGTTGTTGGAT CTCATGGCAGTTTGCCTATCAACTTCGGTACACCGGGGCTGGTTGGATTGGCCCTCTCTTACGCAGCGCCTATTGTATCCTTGTTGGGGAGTTTTTTAAC AAGTTTCACTGAAACAGAGAAGGAGATGGTTTCAATTGAAAGAGCCCTTCAGTACATGGACATTCCTCAAGAAGAACAAGCTGGATGCCTAAAGTTGAAT CCATATTGGCCAAATGAAGGAGTTATTGAATTCCACAATGTTACTTTGAAATATATGCCATCTTTGCCAGCATCACTTAGCAATCTAAGTTTTACAATTG CACGAGGAATGCAGGTTGGATTAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACCCCAATATGTACAGGCTCCAT CACAATTGATGGTATGGACACTAAAAATATTCCTGTCAGAGACCTACGTGCGCATTTGGCTATTGTTCCTCAGAGTCCTTTCCTTTTTGAAGGATCATTA AGGGATAATCTGGATCCATTCAAAATGAATGATGACTCAAAAATTTGGAATGCATTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAATGGCTGGAGGGC TGGATATTCTCATAAAGGAAGCCGGGATGTCATTTTCTGTTGGCCAGCGGCAACTCCTTTGCCTTGCACGTGCACTTCTCAAATGTTCAAAGGTTCTCTG TTTGGATGAATGCACTGCCAATGTAGACATTCTAACTGCTTCACTGCTGCAAAGTACCATATCCAGTGAATGCAAAGGCATGACAGTGATCACAATTGCT CACAGGATTTCAACTGTTCTAAATATGGATAATGTTCTTATTCTTGACCACGGTAGCCTGGTAAGTTCTATTTTCAATAACTTTCCATGTGTCAATAGGG TAAGAAAGAGCAACCTCAACGTTATTCTTTTGTAGTCGGCTTCTTTGATTTATTACTACTTATTTGTCCATGGATTTATTTAGATGGTAATAGAACAGCC AAACTTTTCATCAACAAGTCACTGAATTTTCCATGCCTCGTTATTTGGTCCAACTTCTTTATCATTCTCTATCCTTTTGAAAGCTTCTTTCACCTACAGC TCCTAAATTCTACTATAAAAGTATAATTTAGATGGCAATAGAAAACACAGAAAACTGACTCAAGAAGCTGAAGCCCCACTCCATCCACTCCATTCTCTCC CATTCAGGCTCTCTCTTACTGAGTCTTCATTATATATTTATGGAGTGTGTAGATTTCTTTTATTTTCTGGAGACTACCCTTTTGAATTAGAGAGATCAGT TGAGTAGGTACAATACAAGCTCTCCCAGCACAACATTTTGTTAGAAATGACTGGAGAGTGATCCATGGTTAGCATGCTTAATGGACCATTAACTAGGTTG GCCTTTTTTTTGGGTTTTGACCGAATATCCCCACAACGATAGATCTCTTAACTGCATAAATTATGTACTGGTTGTTGTATGTCAATTGAAAGCTCTTCCA TGTCCCTTCTCTCTTCACTAACCCACATGAAATAACATGTTTTTTCTTGACTATTATGTGTCCTTGAAGGTTGAACAAGGAAATCCACAAGTTCTTCTGA AGGATAACTCCTCTATATTTTCCACTTTTGCTAAAGCTTCATCCATGTAACCATTAATCATCAAAGGAGGCGTCTATAGTTGTTGATGACATCAAACAAA CTTCAAGTGTGGTTTGTTGTTGAGACTGTTATATAACATTGAAGACTAAAGAGTGTTAGAGATGATTCTCTTCAGTGGTATCATATTAGGTGTTTTGGAT CTTCTCTTTGTTGCTCAGTTTCTTCAAAAATAATATCATTGCTCAAAATAGCTTGTACACCACTGTCCATCAAAAGAATGTTGAAAAAAGCATCAGACAA CATCAGTTATTTTGTCTTTCTAACTCAACTCTTTCATATGATACAAAATGTAATTCTTATTTTGTCTAGTAATCAAACTCTGAGTTACAAGATAGGATAA TTATGTTTTTAAAAAACATTATTGTATCATATATCTGCTATTTCAATTCTAAGTATCGTGTAGTCATGATGAGAAGGAAAGGTACTATAGTTTGTCCCTC G BLAST |
| Tissue | pods |
| Gene name | LI_gene_152480; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476695
| Blastp | ABC transporter C family member 13 from Arabidopsis with 62.8% of identity |
|---|---|
| Blastx | ABC transporter C family member 13 from Arabidopsis with 63.69% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G07680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436153.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |