| Id Trinity | TRINITY_DN47430_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_476715 |
| Sequence | TTTTAATATTATTTGACATTTTTAATATTGTTTTATGTTGTTGAACATTATTTTTTTGCTATTGTATCCTTTATATTTAGTAAATTTTATGATTTTTTAA TGTACGGCAATTTTAATTTTTTATAAAAAAAAATCTAAACCGAACCGAAACCACCTATAATATTTGAACTGGACTGAATTAGACATCTTAATATAATCAA TTCAGACCGGACCAGACTGCATATTAATTAAGTGTTTGAATTAGATGATTTTTTGACAAAAAACAATCGAGATGGACCGCGAACACTCCTACCTTCCATT ATACAAAATTTCCTTTTGTTAAATTCAACTTTTACTTACCAAAATTTTGTTAACCGGACGTTTTTGGTATATTAGAATCTGAAATATTCCTTGTATATAT GTGAAGCATCCAATTAAAGTCCACAAGGCTACTCACAATATTAATCATGACAGATAACCATTGTTTAGCTATAATAGTTTCATATTAATTATTAATGTGA ATGACCTGATACACTCAACTTTATTATACAAATTCAATTAACAACATTTGTTAGATTTGGAGGTGCAGCTAGGCATACAAGCAAGTCTGTGCATCTTAGT TAACCTTATTAAAATATATTTGTACAAGCAACTCTGCATCCTTAGTTAATTTTACTAAACCATATTTAGATTTCTCTTTACCCATTATTTATCATATATA TTAATCAATGACCAAAAACTATTTTTTGTTCTCTTTGCCTAGTTTAAATATGCAAATCATGTTTTCGGTTGGACTTAAAGTTGTTTGTCTCGTAAGTTTT GACCTAAAAGGTCACGAGTTCAGACCTGAAAATAGCTGCTTTAACTAACGTTTCATACATTTATCCTCCTCACACTCCACTAGTTTGGAGCATCGTGTAT TAGTAGCCCTTTTTAAGACTTCCTCCATAGAGAGGATGTTGTTGCAATGTTGCCTTCATCTGTTCTATCCTTGAATAGAAAGCTGAACGTACCATATTAG ATCTAAAGAAAATAATAATTTAATGATGAATGGACCTACATATATATGATTGGTATACAGATTCAATGGTGAAGATTTTTTAAGAAGACTTGGAGGGAAG AGTGTGTTATTTGTGGGGGACTCCTTGAGTTTGAATCAATGGCAATCACTCACATGCTTGCTTCACATAGCTGTGCCACATGCCAAATACACTTTACTGA GGACTGGTGATCTCTCCATTTTCACCTTCCAGGTTAGACTTTTATAACCTCTAACTTCTTATTCCTTCTCCCTTTTCTCTTTTATCATTTATTATATCAA CAATAGTTCTCTACTCACATTTCCATTCACCCCAAGTACTATTGATCTATGTCAAAGTGGGTTTGCTTCATCTGACTTTACAAAAACTTCTTTGGATTGA AACCATAGATAGTTTTGGAATTATAAATGATAGTTTAAATGGTAATATGACCTACTAACAACAGCTGGTGTAATAATTGATTGATTTATGATACATTAGA TTCCCATATCTATCTATGTATGCAAAAAGTGTAGCCAAAAAGTTCATTCAATGCAGTTGGTGTTGATTAAAGAAAATAATCTTATGCTTATATATCCATC ATTTAAAAGTAATCACTAGTTTAGCAACTATCCAGACAAAAACAGAAGGAACAACTTAATTAACTGAAATAAGAAGTTATTTGAGTGAGAGACTTAGTTG AAGGCAATTATTGGATTAAAGAGCACATGACTTATAGTTTGCATACCAAGTAATATGCAGAAGTATGATGTTAAAGTGATGTTTCTCCGCAATGCATTTC TGGTGGATACTGTAACCGAAAGTATTGGTCGAGTCCTGAGACTAGATTCCATTGAAACTGGAGATATGTGGAAAGGAGCAGACATATTGATATTCGATTC TTGGCATTGGTGGCTACACACAGGAAGAAAACAACCGTGGGATTTGATTGAAGATGGAAGTAATAGATACAGAGATATGAATCGGTTGGTTGCATATGAG AAAGGGTTAAAGACATGGAGCAAATGGGTTGATGACAATATTGACACTAACAAAACAAGGGTATTCTTCCAAGGAGTCTCTCCAGATCATCTAAAGTATG TACACTCACCTACCTATATAGAATAGGGATCCTCATGTAGTTGTTTTTACGCATATTTATAATGGCAAAAATGTGATTTCATAATAAATAAAAGGATAGA AATATCATTACATATTATCCTTTGTGTTATTTTGTGTCATTTGTCTCTACATTAATTGAGAGGATCATCCTTACTCACTTATGTAATGTAGAAGCTAATG AGTTAGCCCAAACATGATAATAAGTGGAGTCCAAAGATAATGGCCCACCCTTTACCATATGAGAAAAGCATTTACAAAAAAAAAGGCATGCTTCATTATA ATATATATCCAAATAAAAAAACAAGAAACTAATGCATAATCTTGTAAAAATGGAATTGATGTTCTCTGAAATGTTGCAGTGGAGCTAAATGGGGGCAAGC AGGTGCAAAATTTTGTGAGGGGCAAATGAGGCCAGTGTCTGGATTAAATTATCCAGGAGGTGCACATCCAGCAGAAATTGTACTAGAGAAAGTGTTAAGA GGCATGTCAAAGCCAGTTTATTTGCTCAATATTACAACATTGTCACAGCTTAGGAAAGATGGTCACCCATCTGTTTATGGACATGGTGGCCATAATGACA TGGATTGCAGCCACTGGTGTCTACCTGGTGTTCCTGATACTTGGAATCTTCTTCTCTATGCAGCTTTACTTCAAAATTATGCTCTCTAGCTACTTGCTAA TCCTTCTATAATGACCCTCAATTATATATATATATATATATATATATATACTGTTATTTATCTTGTCACTAATAAGAAGCTATATGCTATAGAAGATATA TTTCAGAAAAAAAGCAATGAACTTTGTGTAGGTGCATCAATGGTGACTCATCTTGTATTTGTATAGTAGTTGTTTGGGGTATCATATATATAACAAGGCA ATATATATATATATATATACTGAAATTTTCTTCATAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_152524; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476715
| Blastp | Protein trichome birefringence-like 43 from Arabidopsis with 62.39% of identity |
|---|---|
| Blastx | Protein trichome birefringence-like 43 from Arabidopsis with 62.39% of identity |
| Eggnog | Pfam:DUF231(ENOG4111BK6) |
| Kegg | Link to kegg annotations (AT2G30900) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459204.1) |
| Pfam | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PF13839.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |