Ll_transcript_476622

• Id Trinity: TRINITY_DN47436_c5_g1_i1
• Name Transcript: Ll_transcript_476622
• Sequence: TAAGAATAAAATGATGTTTGCTACTGTGGAGAAAAAGTAAATATTTTCTTATTTCATAAGGAGTTATAATAAATTATAAAATAACACGTAGGAAGTTTTA TTGTACATGCTCTAAGTAAGTGTTGTGGTATATGGTATTTGGGTGGTGGAGGAAAAGACATGTGGAATGGTTAATCTGAGTGATATATCCAAAATCCAAT CCAATCCTAGGAGATATATGTATTATTATGTATGATGTAATGAAGGAGTGAGTTTGGAAATAATGCCCCTCTTCTCTGCAACTCTTGGCTTTTGTTCCAC TTCATTCTTCTTCCATTCTTCTACTCCTTCCACTTTCCCAAAATGCCCTTACAACTGTTCTGTCTCCAATTCTATCAATAATACAGATTCTGGAATCCTT CATCGCCCTCTTGTTACTCCTCTTGACCCCGACCACCTTGCTATTCGTCAGGCTCGGAGATCATCAGATTGGAAGGCTGCAAATGCATATAAAGAGAGTT CAATAATATACAATGGAAGGGTAGAAGAGTATAACACTGGAGGCTTATTGATTCGCTTTTTTACCATTTTGGGTTTCCTTCCTTTTCCTCAGTTCAGCCC ATCCCATGCTTCTAAAGAACCTCACAAAAGCATCCAAGACATTGCAAAAGCTTTGGTTGGTTCTATCTTATCCGTCAAGGTAATTGTGGCTGACGAGGAT AACAGGAAATTGATCTTCTCTGAAAAGGAAGCTGCCTGGTCTAAATTCTCTGGACGGGTCAAGGTTGGAGACATTTTTGAAGCAAGAGTTGGCTCTGTTG AGGATTATGGTGCTTTTGTTCATTTGCGCTTCCCCGATGGTCTTTATCGCCTTACTGGACTAGTACACATCTCAGAAGTGTCATGGGATCTAGTTCATGA TGTAAGAGACATCTTAACAGAAGGTGATAAATTGAGGGTTAAAGTTATCAATGTTGATAGAGAAAAATCAAGGATTAAACTGTCAATTAAACAGTTAGAA GAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGATTCAGCATATTCTGATTCTTTGAGCGATGATGATAGCAGTGTTATTGAGCCTC TTCCAGGACTTGAGACAATCCTTGAAGAGCTACATAAGGAAGATGGTATATTTGATGCAAGAATCAGTCGTCAAGGGTTTGAAAAACGTGTTGTCTCACC AGACTTGCAGCTTTGGCTTTCCAATGCACCTCCTTCAAACCAAAGGTTTACTCTCCTTGCTAGAGCTGGAAGACAGGTGCAGGAGATCCACTTAACTACA TCCCTTGATCAAGAAGGTATCAAAAGGGCATTACAAAGAGTATTGGAGCGTGTCCCCTGAATCTCACTCAGGAACAGTTCTTCCAGCTCCATAATATCTC AATGATTTTGTACAGTTATCACACATTTAAAGTTCAGATATGACCCTGCATATTCCATTACATCAAATCATCGTGATTTAACTCTAAAAAAAAGTCCTTA TAAGAACACTCCATCAAATAACATTTGCTTGAATTCATTCATTCAAAACAAGTACTATTTTGAATAGATAATGAAGAATCAGCAACACAGGAAACATAAA AACTTATTACATATTGTCCTGAAATGGGTGTTCCCTATCATGTCATATTCATAGATGATATTATTTTCCCTTTAGGATTCGTAATTGTTCATTCAAGCAA GTGTCGTTTTCAGGAATTAAATCATTGATCTTTTGGTTTTTTTGGGGTTTTACATGATTAGATTAATATTTTGTTAGTATATATATATAGATGATATTAT CATTGATTAACTTATTAAATAGTTCTTCAATTAATGCATCTTTCATTAGATGATGCACCATAGTTATTGAATGAATGAGGATCATTGATTTGGATAAACT TTTAAATCAATGATTAGATTAGTATAGGTTATTCGATAGGCATGTTGAATGTTGTTTATATGGAATTAAGAAGTTTTAATATTCCTGTTTCTTTTTTTAT AGCACCATTTTGGATAATTTTATACTAATTAAGAGTTGTAAAAATATGTTTTAAATTTGTAAATGATTGTACCTAGTTTACAAAATTGTCATTATTTTTT TAAGTGTGATGCTTGAAAAAATAAACCTATTTCAATAATCTCTTTTCAGTGTTGTGATATGATTGAATAACAGTGTTCATTAATCATGATGAATTGGGTC CAATATTAGTTTGATAGAAACTAGTACTTATTTTTCTTCCTTTTTGTAAAGTGCATCATGTGGCATATGAAAAAAGGTTTGTGGCCAAG
• Tissue: pods
• Gene name: LI_gene_152583;
• Additional information: details;

Expression of Ll_transcript_476622

FPKM

• PAB: 78.5
• PNAB: 32.2
• PS1: 23.1
• PS2: 18.6
• PS3: 25.3
• PW1: 33.4
• PW2: 42.5
• PW3: 34.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476622

• Blastp: 30S ribosomal protein S1, chloroplastic from Spinacia with 27.23% of identity
• Blastx: 30S ribosomal protein S1, chloroplastic from Spinacia with 27.23% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438287.1)
• Pfam: S1 RNA binding domain (PF00575.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;