| Id Trinity | TRINITY_DN47436_c5_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_476624 |
| Sequence | TAAGAATAAAATGATGTTTGCTACTGTGGAGAAAAAGTAAATATTTTCTTATTTCATAAGGAGTTATAATAAATTATAAAATAACACGTAGGAAGTTTTA TTGTACATGCTCTAAGTAAGTGTTGTGGTATATGGTATTTGGGTGGTGGAGGAAAAGACATGTGGAATGGTTAATCTGAGTGATATATCCAAAATCCAAT CCAATCCTAGGAGATATATGTATTATTATGTATGATGTAATGAAGGAGTGAGTTTGGAAATAATGCCCCTCTTCTCTGCAACTCTTGGCTTTTGTTCCAC TTCATTCTTCTTCCATTCTTCTACTCCTTCCACTTTCCCAAAATGCCCTTACAACTGTTCTGTCTCCAATTCTATCAATAATACAGATTCTGGAATCCTT CATCGCCCTCTTGTTACTCCTCTTGACCCCGACCACCTTGCTATTCGTCAGGCTCGGGTCTCTCTCTCTCTTTCTTTCTTGAATTGAATTGAATTATAAT AGCTATTTAATTGAATTATAATAATTATAATACTTATTTTGAATGAAGTAGAGATCATCAGATTGGAAGGCTGCAAATGCATATAAAGAGAGTTCAATAA TATACAATGGAAGGGTAGAAGAGTATAACACTGGAGGCTTATTGATTCGCTTTTTTACCATTTTGGGTTTCCTTCCTTTTCCTCAGTTCAGCCCATCCCA TGCTTCTAAAGAACCTCACAAAAGCATCCAAGACATTGCAAAAGCTTTGGTTGGTTCTATCTTATCCGTCAAGGTAATTGTGGCTGACGAGGATAACAGG AAATTGATCTTCTCTGAAAAGGAAGCTGCCTGGTCTAAATTCTCTGGACGGGTCAAGGTTGGAGACATTTTTGAAGCAAGAGTTGGCTCTGTTGAGGATT ATGGTGCTTTTGTTCATTTGCGCTTCCCCGATGGTCTTTATCGCCTTACTGGACTAGTACACATCTCAGAAGTGTCATGGGATCTAGTTCATGATGTAAG AGACATCTTAACAGAAGGTGATAAATTGAGGGTTAAAGTTATCAATGTTGATAGAGAAAAATCAAGGATTAAACTGTCAATTAAACAGTTAGAAGAAGAT CCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGATTCAGCATATTCTGATTCTTTGAGCGATGATGATAGCAGTGTTATTGAGCCTCTTCCAG GACTTGAGACAATCCTTGAAGAGCTACATAAGGAAGATGGGTATGCTTCCATCCTTATATCTTGTTCTGTAAATTGTAATGTTCTAGGTAGCAAGAGTTT AACTACTTGAAATAACCCGTGGTTACATCCAAAATCCCTAGCCACATGGTCTAAATAATTCTTTTAATAAAAAGATAAAAATACTACTGCCATGGTTTTA AGTTACAGTTGTGGCCATTATGATTGTGTTCATCGTGATACAGATTGTGGTCGTTTTTGTGGTTCAAAATTTGATTTCAGAATATGATGCGGTCCAAACT GCTCCTACATAGAATGTGAAATATTCCTAACAACTATATGGACTTTTTATTGCATAATGAATAGGAACATAACAGCTTCTGAGTCATACTAATCCAGACA TGCTTAGCAAATCTTGTTCTTTTGAAATACCTTTTATAATATATGTGATGATATGAATTGTCTGATAAATTTTCAATGGTGAAATATGTGACAGTATATT TGATGCAAGAATCAGTCGTCAAGGGTTTGAAAAACGTGTTGTCTCACCAGACTTGCAGCTTTGGCTTTCCAATGCACCTCCTTCAAACCAAAGGTTTACT CTCCTTGCTAGAGCTGGAAGACAGGTGCAGGAGATCCACTTAACTACATCCCTTGATCAAGAAGGTATCAAAAGGGCATTACAAAGAGTATTGGAGCGTG TCCCCTGAATCTCACTCAGGAACAGTTCTTCCAGCTCCATAATATCTCAATGATTTTGTACAGTTATCACACATTTAAAGTTCAGATATGACCCTGCATA TTCCATTACATCAAATCATCGTGATTTAACTCTAAAAAAAAGTCCTTATAAGAACACTCCATCAAATAACATTTGCTTGAATTCATTCATTCAAAACAAG TACTATTTTGAATAGATAATGAAGAATCAGCAACACAGGAAACATAAAAACTTATTACATATTGTCCTGAAATGGGTGTTCCCTATCATGTCATATTCAT AGATGATATTATTTTCCCTTTAGGATTCGTAATTGTTCATTCAAGCAAGTGTCGTTTTCAGGAATTAAATCATTGATCTTTTGGTTTTTTTGGGGTTTTA CATGATTAGATTAATATTTTGTTAGTATATATATATAGATGATATTATCATTGATTAACTTATTAAATAGTTCTTCAATTAATGCATCTTTCATTAGATG ATGCACCATAGTTATTGAATGAATGAGGATCATTGATTTGGATAAACTTTTAAATCAATGATTAGATTAGTATAGGTTATTCGATAGGCATGTTGAATGT TGTTTATATGGAATTAAGAAGTTTTAATATTCCTGTTTCTTTTTTTATAGCACCATTTTGGATAATTTTATACTAATTAAGAGTTGTAAAAATATGTTTT AAATTTGTAAATGATTGTACCTAGTTTACAAAATTGTCATTATTTTTTTAAGTGTGATGCTTGAAAAAATAAACCTATTTCAATAATCTCTTTTCAGTGT TGTGATATGATTGAATAACAGTGTTCATTAATCATGATGAATTGGGTCCAATATTAGTTTGATAGAAACTAGTACTTATTTTTCTTCCTTTTTGTAAAGT GCATCATGTGGCATATGAAAAAAGGTTTGTGGCCAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_152583; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476624
| Blastp | - |
|---|---|
| Blastx | 30S ribosomal protein S1, chloroplastic from Spinacia with 27.22% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438287.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |