| Id Trinity | TRINITY_DN47438_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_475231 |
| Sequence | CAAAATGATTTCTGTAGTTTCCTCTTTGCAAACTTATTATGTTACTCATTATTTTTTCCAGGCTTTTGCGAAAGATGCTCGTTTTGAACAAATATGGAAA AGCAGGAGGGGAAACAAAGGGGCAGAGCATGAAAATGCATTACAAGACATATGCCATTTCTATGACATCGTCCGTGTTGACAAGATGCAAGAGGAGTAAG TATTTCCATCAAAGTTAATTTGTTTTCTTATGATTTGACAATTATAGCAAGAAACCCATTTCCTGTGATTAATGCAGAGATATCTCTTTGGAGGATCAAA ATCTTTTGTCTAGTTTCCTCCCTTTACTAAAAGAGGTGATTCCTGATGCTGCTACAGAGATTGAAGCTGATCTTGCGAATTCAAAAAAAGGTTGTTGGTT AGTTGCAAACTATGATTGAAATGTTACCAGTATTTGCTGCTTTTGGCCAAAGTGCCACTTATTTGATTTAAATAGTTGACAGACGATGGAGTCATGATCA TCCTTAGGCGAACACATTTTCTTGACCAACAAGGTATAAGGCTCCGCTAGATCACTAGGATCCGATGACCAAAAGGTCAAGGGTTCGGGTCCTGGGAGCG ACACTTGTTAGGAAGGGCAGCCACATACCCCAAAAGGGATTAGTTCCTTATTCATAGGGTGAGGGGATACCTTTTGTATTACAAAAAAAAACACATTTTC TTGTTCTGGTTGGATAGAAAAGATTATATTTGTAGAGCTATCTAGTAGTATCATATCATTCATGCTTTCAACACCTTCAGTCAATGCTTTTGAAAATTCT TATTGTTGCTGAGCTGCTGTCCTTTTCGGAACTGTTTCTCTTTAATTGTTTATGACGCATTCTCTCACGGAACATAATACAGATGATTACGTGTATGATC TCTACACGGTGAATGACGAGATGGACATGGACGCTGATGATACTTCATATTCTTTACCACTAGTTCAAGTCGATGAAGATGACTATTACGATGGCCCGGA TGATTCAGAGTATGAAACAGATGACTCAAATGATGAAAATAATCCATTGAATGATTATCCCGACGAGTTGTCTGAAGACGAGGAAGAAGGTTCAGAAAGT GAGGATAGCAACGCTAGTAAGGAATCATCGGACGAGGATAATGAAGAACATGGTTTTTCCAGAGACACCGAAGCCGATCCATTATATGATGAGGATTTTG ATAACTATGATGGTAGAGTCGGTTACGATGTCGATGATGATGAAGATTGGAAATGGTCTCATAGATGATGAGATTGGCCTATATTGCTAGACAAAAATGT TGGCTATGCACAGTTTCAAATGTAAAAAACTACCTTTGTGTTTAGTTCTGAATGTTGTAGACATTACTTTGTTCACTAAGGATTGTAATTTTGAGGCTGA TCTATGACTATTTGCTTGATATAACTAAAAATTTTGTTTTTATTTTTTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_152596; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475231
| Blastp | RNA-directed DNA methylation 4 from Arabidopsis with 49.21% of identity |
|---|---|
| Blastx | RNA-directed DNA methylation 4 from Arabidopsis with 69.7% of identity |
| Eggnog | NA(ENOG410ZJRU) |
| Kegg | Link to kegg annotations (AT2G30280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438714.1) |
| Pfam | Transcription factor Iwr1 (PF08574.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |