Ll_transcript_475234

• Id Trinity: TRINITY_DN47438_c2_g1_i5
• Name Transcript: Ll_transcript_475234
• Sequence: CTTTACTAGTGTAGTCTAGAGCACTCGGTTATCGCTTTGTTTGATAATGGAGGGAAGCTCTTCTTCTTCTTCAATGGCTGCGCCTCCACCTAAGCCTGTC ATCGTTAGGGTCAAACGAAAATCCTTTCATTCTCCTCTTCATGCTTTTTGGCTGGAAATCAATGAGAGGCCATTGAAACGCCCTTTGCTGGATTTTCAAA ATCTATCAGTCTCCTCAGAATCTGCTCAAAAGGCGGAATTTCATAACAAGAAGGTTTTCATGCAACACGTGGAGACAATAAGCAGCTCTGAAGTCACCCG TGATATCGTGCAGTCCTTTGTGGATCCTGGTTCTAGCGGTGCATTTGAATCTAAATCAAAAATCGATGAAAGGAAGAACTTCTTCAAAAAGGATAATAAG CAAGATCAGCTGGTTAGAGCTAAACAACAAAAAGAGGCTTTTGCGAAAGATGCTCGTTTTGAACAAATATGGAAAAGCAGGAGGGGAAACAAAGGGGCAG AGCATGAAAATGCATTACAAGACATATGCCATTTCTATGACATCGTCCGTGTTGACAAGATGCAAGAGGAAGATATCTCTTTGGAGGATCAAAATCTTTT GTCTAGTTTCCTCCCTTTACTAAAAGAGGTGATTCCTGATGCTGCTACAGAGATTGAAGCTGATCTTGCGAATTCAAAAAAAGATGATTACGTGTATGAT CTCTACACGGTGAATGACGAGATGGACATGGACGCTGATGATACTTCATATTCTTTACCACTAGTTCAAGTCGATGAAGATGACTATTACGATGGCCCGG ATGATTCAGAGTATGAAACAGATGACTCAAATGATGAAAATAATCCATTGAATGATTATCCCGACGAGTTGTCTGAAGACGAGGAAGAAGGTTCAGAAAG TGAGGATAGCAACGCTAGTAAGGAATCATCGGACGAGGATAATGAAGAACATGGTTTTTCCAGAGACACCGAAGCCGATCCATTATATGATGAGGATTTT GATAACTATGATGGTAGAGTCGGTTACGATGTCGATGATGATGAAGATTGGAAATGGTCTCATAGATGATGAGATTGGCCTATATTGCTAGACAAAAATG TTGGCTATGCACAGTTTCAAATGTAAAAAACTACCTTTGTGTTTAGTTCTGAATGTTGTAGACATTACTTTGTTCACTAAGGATTGTAATTTTGAGGCTG ATCTATGACTATTTGCTTGATATAACTAAAAATTTTGTTTTTATTTTTTAAC
• Tissue: pods
• Gene name: LI_gene_152596;
• Additional information: details;

Expression of Ll_transcript_475234

FPKM

• PAB: 3.6
• PNAB: 11.8
• PS1: 12.9
• PS2: 15.7
• PS3: 12.1
• PW1: 13.6
• PW2: 9.8
• PW3: 9.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475234

• Blastp: RNA-directed DNA methylation 4 from Arabidopsis with 48.94% of identity
• Blastx: RNA-directed DNA methylation 4 from Arabidopsis with 47.86% of identity
• Eggnog: NA(ENOG410ZJRU)
• Kegg: Link to kegg annotations (AT2G30280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438714.1)
• Pfam: Transcription factor Iwr1 (PF08574.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;