Ll_transcript_476547

• Id Trinity: TRINITY_DN47439_c3_g2_i2
• Name Transcript: Ll_transcript_476547
• Sequence: CTTCCTTCAACTCCTTCTACCACTTTCTCACTTCAACCAACTTCCTTGTTCGGTTTGTTCTTTTCTTCCCTTCTCTTCCTTAGGCAAACAAAACCAAAAG CTTCAGTTAGAATAAACTAAAAAAATGATGTCTAGAGTTTCATTGATGGTAGAAGCTGACAGAGAACAACACTCCAATGGCAACAACAACATCAACGAGG ATGAATTGAGTTCTTTGTGTGGTTTTAAACCCACGTTTGAGGTTAGTGAAGAATGGTTCATGGTAAATAACAGTAACCAAAATCACATAGCTTGTTCTCC CAACTTTGCTGACTCAGATAATCTATTGTTTCATCCATTAGCCTCTTCTTCATGCTCACCCTCTTCTATTCCCACCAATCTGCACTCATCTCATGTGCAA TACTTTCTATCTCCAAAACCTACCTTTTCTTCTCTTCTCAGTACCAACCCTTTGGAGCATGGTTTTGATCACAGTAGTACTTATGATGTGGGGTTTCTTG AGCCTCAAGCTTCAACTACTTCACCATCAGTGCTGAACAGAACTTCTTCTACACTATTGGGTGCCTTCGATGACTTGAACTCTAAGAATCAGTTAAGTAC ACTTCCCAACTTAGCCTCATCAAATATCATTCAATTGCAGCAAGATGCAACCAACTTTGCAGGTTTTCAGAACAGCTTTGAAGAAGGTTCTGGAGGGAAT AATAAGGCAATGTTTCTGAACAGATCCAAGATTTTAAGACCACTTGAGTCTCTGCCTCCATCTGGTGCACAACCTACTTTGTTTCAGAAGAGAGCAGCAC TCAGAAAAAACATGGGATCAGAAAGTGGCATTGGTATTGGTACTGGTGGTTCAGTTTTTGGTGAAGGAAGTGATAGGAAAATGATGAAGATGAGTAATAG TGTGGAATTAGATATTGAAGATGGAAGCTTTGATGGGTCTGGATTGAACTATGATTCTGATGATTTGACTGAGAGTAATAATAAGGTGGAAGAGAACAAT GGTAGGAATGGTGGAAATAGTTGTAATGGGAATAGTACTGTGACTGGTGGTGTTGTGGATCAGAAAGGGAAGAAGAAGGGCATGCCTGCTAAGAATTTGA TGGCGGAACGCCGCCGGAGGAAGAAGCTCAATGATAGACTCTATATGCTGAGGTCTGTTGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATCCTTGG GGATGCAATTGAATATCTGAAGGAACTTCTGCAAAGGATCAATGACCTTCATAATGAACTGGAGTCCACACCTGGTAGCTCTTCACTCACCCCT
• Tissue: pods
• Gene name: LI_gene_152613;
• Additional information: details;

Expression of Ll_transcript_476547

FPKM

• PAB: 2.1
• PNAB: 0.8
• PS1: 0
• PS2: 3.3
• PS3: 0.5
• PW1: 0.7
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476547

• Blastp: Transcription factor ICE1 from Arabidopsis with 42.86% of identity
• Blastx: Transcription factor ICE1 from Arabidopsis with 41.8% of identity
• Eggnog: inducer of cbf expression(ENOG4111GT2)
• Kegg: Link to kegg annotations (AT3G26744)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430106.1)
• Pfam: Helix-loop-helix DNA-binding domain (PF00010.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;