| Id Trinity | TRINITY_DN47442_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_475124 |
| Sequence | TTTAAATTCCCGTTCCCGCGCTTGAAGCTCATTCTTCATTTATCACATAGCTCCGTTCCGAATGAATGAAAATGAGAATGAAGATTAACAAGACCTGCGA TCTCTCTTCCATCTCTGTCTTCCCTCCTCCTATCACTTATTCTAGGCGGCAAAACAATGTGCCTAGTGGATTGCCAGCACCACCACAGCATCGGTCGCAA CAATCTCAGCAGTCATTTTCGCAAACATCACAGCAGCATCGGTCACAACCATCTCAGCAGTCATTTTCTCAGGCACATTCATCTCAACAAGGAGTGTTTT CTCATTTCTCCCAAAGCTCTCTGGATGAAGCTATCATTACACATGATCAGAGAGTCGGTTCTCAAGAACATGATAACTCTTTGAGGAAGATTTCTAACGT GCCTCGACTTGCATACTCACACGAAGAGAGTCAGCCACCTAACTCGAGATCTTCATCAAATCTAATTGTCAAATGGAGGCCTGAAGATCATAAAAATCAG TTGAGTGAAGGAATTGAATACCGAATTGGCATAATGGAAACTTCGTTGAGCAGGTTCGCAATGATCTTTGACTCTGTTCAAAGTGACGTAATGCAAGTAA ACAAAGGAACAAAGGAACTCCTTTTAGAGATGGAATTCATAAGGCAGAAATTGATTGCTCTGGATAACTCAATTCAGTTACTGACGAAGGGACAAGAAGA AATTAAAGCAAGCATTGCTGGGAGTTTGAAATCTTTATCTGAACATATGAGCAACCAAGAGAAGTTGCAGGAAGTATATTCGGCAATTTCTGCCTTGCCT CAGCTAATTCAAAAATCTATGCAAAGTGTACAAAGTGATCTCCTTAACACCACCATCGAAATGCAGGAAATCTCCTGCACATTAAAAAGCCTCAACCAAA AGGATCAGCCACAGTCTATTCTAACTTCAAAGAGTATTAGCAATCGAGATACTACATCCAGAAAGCATCAGCCTGTTGCTAATGAAAAGAAGATGAATTT GCGAGGTACTGTAGTTCCAAAGGAAGAAATGGGAAGCTGGAAACCAGTGAAAAAAGAGAGAGTTACTTTCTCAGACAGAAAACCTGAGAAGGTGCACAAG GAAAATGAACCATACACTGAAAAGGTAGGAAGAGACTGTGCAATTGTCATTGAATCTGATGAGGATACTGATGGAGGTTTTTCCTGCTTGGTTGGAAAAA ATGCAGGAAAATACCTATTCGGAAAATTGAGCAGGGAAGAAGAGGAAGAAGCCCTGTCGATTTTGCAAAAAGCAAGGAGGCGTAAGAGAAGGTATCCTAA CGCTATGCCTATAACAATCCTCTGAAGATCTCAAACTCACAACGTTTGCTTTCAATTCAAAATTGCTGAAACGGTTAATGAGCAAAACCCGATGTCATTT GAGCAGGTGCAACTTGGTATTTTCAGATGCTGAAGCATATCGTTTCTTTATTGAGTTTGCTGAGTCCTATGAGCTTTGTTTGGCACATATGACACATTTG TTTGTTCATTACACTTTGGTCACATTCTTATGTATGTTTATTGTTTATTTTCTGAACTAAACATATAATTTTACCCAATTTGGGTTTTGGCTTTTTCGGA AGTAATTTACTAATTGGAAATTTAAAGAGGTTATTCTTGATTGTAATGCATATCAAGATCTCTGTTTTCTTCTTCTTGCTGGCATCAAATTGAGAACTTG ATAGCTAGAAGAAAAGCTCCAAACCAACAAGGCATTCATGAAACCAGGTAAATGCATATCAATATCTTAAGTGGAGAAATATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_152629; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475124
| Blastp | Protein PAIR1 from Oryza sativa with 27.37% of identity |
|---|---|
| Blastx | Protein PAIR1 from Oryza sativa with 26.83% of identity |
| Eggnog | NA(ENOG410YM0G) |
| Kegg | Link to kegg annotations (4331321) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435404.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |