Ll_transcript_476019

• Id Trinity: TRINITY_DN47445_c4_g1_i11
• Name Transcript: Ll_transcript_476019
• Sequence: ATTCAATGTTTGGTTGTTGTTATTATATAGCCCCTGCGTGTTTCATTACAAATTCAATAAGGAACACAATAAATGAGAACGACACTGAGAGGGTTTTGAG TTTTGACCTGAGACTTTCTCTTACACTTGCAGCCTCACTGGAACATCGATGGCGGCCTCACACCTCCTTTATCATTCTCCTTCCTTTCCAAAAACCTTAA ATCACTCTTTGAACCAAAACTCTTTCGCCCGAAACCTCGTTCTACCTCTCAAAGCCACCTTTAAACCACTGGTTCTTAGAGCAGTTTTGTGTCAGAGTAA CACTGCTAAACCCCAATTACATGACTCCCAGAGTACCACTAATTTTCAACACTGTTTCACCAAGTCTGAAGATGGGTTTCTGTACTGTGAGGGTGTTAAA GTGCATGAGATTATGGAATCTGTTGATAAAAGACCTTTTTATTTGTACAGTAAGCCTCAGATTACTAGAAATGTCGAGGCCTATAAGGACGCGTTGGAGG GATTGACATCTATAATCGGTTATGCTATCAAGGCCAACAACAATTTGAAGATTCTGGAGCATTTGAGGCACTTGGGTTGTGGTGCTGTGCTTGTAAGTGG GAACGAGCTTAGGCTGGCGCTTCGTGCTGGGTTTGATCCCAAAAGGTGTATCTTTAATGGCAACGGAAAACTCTTGGAGGATCTGGTCTTGGCTGCCCAA GAAGGTGTTTTTATCAACATTGATAGCGAATTTGACCTGGAAAACATTGTAGCGGCTGCAAGAATTGCTGGAAAGAGGGTCAATGTTTTACTTCGAATAA ATCCTGATGTGGATCCACAGGTCCATCATTATGTTGCTACTGGGAATAAGAACTCTAAATTCGGCATTAGAAATGAAAAGCTGCAGTGGTTTCTAGATGC TGTGAAGGAGCATCCTAATGAAATAAAGCTTGTAGGGGCCCACTGCCATCTTGGGTCAACAATTACCAAGGTGGACATTTTCAGGGATGCTGCAACTATT ATGGTTAACTACATTGACCAAATCCGAGCCCAGGGTTTTGAAGTTAATTATTTAAATATTGGTGGTGGACTTGGCATCGATTATCATCATTCTGGTGCTA TCCTTCCTACACCCAGAGATCTCATTGATACTGTACGGGAGCTTGTCCTTTCACGTAATCTTAATCTCATCATTGAACCTGGGAGATCACTCATTGCAAA CACGTGTTGCTTAGTTAACCGGGTGACGGGTGTCAAAACTAATGGATCTAAAAACTTCATTGTAATTGATGGAAGCATGGCTGAACTTATTCGCCCTAGT CTTTATGATGCTTACCAGCACATAGAGCTGATTTCCCCTGCCCCAGCAAATGCCGAGGTTGCGAACTTTGATGTGTTTGGCCCTGTCTGTGAGTCTGCAG ATTTCTTAGGAAAAGATAGGCAGCTTCCAACACCAGACAAGGGTACTGGTCTGGTTGTTCATGATGCTGGTGCTTATTGCATGAGCATGGCATCAACTTA CAATCTAAAGATGCGGCCTCCTGAGTATTGGGTTGAAGACAATGGAACAGTGAGCAAAATCAGACATGGGGAGACATTTGAAGACCAC
• Tissue: pods
• Gene name: LI_gene_152668;
• Additional information: details;

Expression of Ll_transcript_476019

FPKM

• PAB: 0.8
• PNAB: 11.4
• PS1: 6.7
• PS2: 3
• PS3: 5.8
• PW1: 12.7
• PW2: 10.8
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476019

• Blastp: Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 77.29% of identity
• Blastx: Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 77.29% of identity
• Eggnog: Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)(COG0019)
• Kegg: Link to kegg annotations (AT5G11880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431286.1)
• Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain (PF02784.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;