Ll_transcript_476000

• Id Trinity: TRINITY_DN47445_c4_g1_i2
• Name Transcript: Ll_transcript_476000
• Sequence: ATTCAATGTTTGGTTGTTGTTATTATATAGCCCCTGCGTGTTTCATTACAAATTCAATAAGGAACACAATAAATGAGAACGACACTGAGAGGGTTTTGAG TTTTGACCTGAGACTTTCTCTTACACTTGCAGCCTCACTGTTGTTTTTCAGGAACATCGATGGCGGCCTCACACCTCCTTTATCATTCTCCTTCCTTTCC AAAAACCTTAAATCACTCTTTGAACCAAAACTCTTTCGCCCGAAACCTCGTTCTACCTCTCAAAGCCACCTTTAAACCACTGGTTCTTAGAGCAGTTTTG TGTCAGAGTAACACTGCTAAACCCCAATTACATGACTCCCAGAGTACCACTAATTTTCAACACTGTTTCACCAAGTCTGAAGATGGGTTTCTGTACTGTG AGGGTGTTAAAGTGCATGAGATTATGGAATCTGTTGATAAAAGACCTTTTTATTTGTACAGTAAGCCTCAGATTACTAGAAATGTCGAGGCCTATAAGGA CGCGTTGGAGGGATTGACATCTATAATCGGTTATGCTATCAAGGCCAACAACAATTTGAAGATTCTGGAGCATTTGAGGCACTTGGGTTGTGGTGCTGTG CTTGTAAGTGGGAACGAGCTTAGGCTGGCGCTTCGTGCTGGGTTTGATCCCAAAAGGTGTATCTTTAATGGCAACGGAAAACTCTTGGAGGATCTGGTCT TGGCTGCCCAAGAAGGTGTTTTTATCAACATTGATAGCGAATTTGACCTGGAAAACATTGTAGCGGCTGCAAGAATTGCTGGAAAGAGGGTCAATGTTTT ACTTCGAATAAATCCTGATGTGGATCCACAGGTCCATCATTATGTTGCTACTGGGAATAAGAACTCTAAATTCGGCATTAGAAATGAAAAGCTGCAGTGG TTTCTAGATGCTGTGAAGGAGCATCCTAATGAAATAAAGCTTGTAGGGGCCCACTGCCATCTTGGGTCAACAATTACCAAGGTGGACATTTTCAGGGATG CTGCAACTATTATGGTTAACTACATTGACCAAATCCGAGCCCAGGGTTTTGAAGTTAATTATTTAAATATTGGTGGTGGACTTGGCATCGATTATCATCA TTCTGGTGCTATCCTTCCTACACCCAGAGATCTCATTGATACTGTGAGGACTACCCCAGATATCTCACTGTGTCTTCCCAATTCTATGTCATTATGCGCT AAGTTTTCAATTCCTTATAAGACCGAGGCATAGCTATTAACTGATAAATGGGGATTATAAATATTGCAGTGGGTACATTTAAATGCAGCATTTTGTAAGT TGTGACATGCTGGGTCATGTGGAAAACAAGTCCTGTGAGAATTAATACATTTGCATGAATTACATCAATGTATAGTGTTTGTATTTGATGGACTAGATCA CTGTCATGTTTTGTAATGCATGTATTGTTGGTGGTCAATTGTACTCCTATGAGTTAACTGATTTGATAAGGGGCTGAGTGAACTTCCATGCCTGAGAATT TCTGTAGGATCATCTATGGGGTTTGGGTCTCTCTTTAGTCACTTCACTTTTGGCTGATAATGGTTTTGGTGAACACTTGTTATTTGTGATCAGTGAGTAG TTCATATGTGATATATAATATTCATATACTTGGATTACATGTGTTATTTATTTATTTTTGTTTCACATTTGCTGGAAGAGGTACCTGCATGTTTATTTAT GCATATCCTTTAAATCATATAGAGGAACATATTCTGCTTCTTTCTTATAAGTGTCTGTTAATTTCACTGAATTTGGTATGCTCTACTGCAATCTAAATGC TTTCCAATAAGAAAGATGCACTTTTTTTTTCTTGAAGTGTTCCTGCTATTTCTGTATTTGCTAATTCATGGCTGGACTAGGTACGGGAGCTTGTCCTTTC ACGTAATCTTAATCTCATCATTGAACCTGGGAGATCACTCATTGCAAACACGTGTTGCTTAGTTAACCGGGTGACGGGTGTCAAAACTAATGGATCTAAA AACTTCATTGTAATTGATGGAAGCATGGCTGAACTTATTCGCCCTAGTCTTTATGATGCTTACCAGCACATAGAGCTGATTTCCCCTGCCCCAGCAAATG CCGAGGTTGCGAACTTTGATGTGTTTGGCCCTGTCTGTGAGTCTGCAGATTTCTTAGGAAAAGATAGGCAGCTTCCAACACCAGACAAGGGTACTGGTCT GGTTGTTCATGATGCTGGTGCTTATTGCATGAGCATGGCATCAACTTACAATCTAAAGATGCGGCCTCCTGAGTATTGGGTTGAAGACAATGGAACAGTG AGCAAAATCAGACATGGGGAGACATTTGAAGACCAC
• Tissue: pods
• Gene name: LI_gene_152668;
• Additional information: details;

Expression of Ll_transcript_476000

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0.4
• PS2: 0
• PS3: 0.1
• PW1: 0.6
• PW2: 0.8
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476000

• Blastp: Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 70.86% of identity
• Blastx: Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 70.86% of identity
• Eggnog: Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)(COG0019)
• Kegg: Link to kegg annotations (AT5G11880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431286.1)
• Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain (PF02784.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;