Ll_transcript_476005

• Id Trinity: TRINITY_DN47445_c4_g1_i5
• Name Transcript: Ll_transcript_476005
• Sequence: ATTCAATGTTTGGTTGTTGTTATTATATAGCCCCTGCGTGTTTCATTACAAATTCAATAAGGAACACAATAAATGAGAACGACACTGAGAGGGTTTTGAG TTTTGACCTGAGACTTTCTCTTACACTTGCAGCCTCACTGGAACATCGATGGCGGCCTCACACCTCCTTTATCATTCTCCTTCCTTTCCAAAAACCTTAA ATCACTCTTTGAACCAAAACTCTTTCGCCCGAAACCTCGTTCTACCTCTCAAAGCCACCTTTAAACCACTGGTTCTTAGAGCAGTTTTGTGTCAGAGTAA CACTGCTAAACCCCAATTACATGACTCCCAGAGTACCACTAATTTTCAACACTGTTTCACCAAGTCTGAAGATGGGTTTCTGTACTGTGAGGGTGTTAAA GTGCATGAGATTATGGAATCTGTTGATAAAAGACCTTTTTATTTGTACAGTAAGCCTCAGATTACTAGAAATGTCGAGGCCTATAAGGACGCGTTGGAGG GATTGACATCTATAATCGGTTATGCTATCAAGGCCAACAACAATTTGAAGATTCTGGAGCATTTGAGGCACTTGGGTTGTGGTGCTGTGCTTGTAAGTGG GAACGAGCTTAGGCTGGCGCTTCGTGCTGGGTTTGATCCCAAAAGGTGTATCTTTAATGGCAACGGAAAACTCTTGGAGGATCTGGTCTTGGCTGCCCAA GAAGGTGTTTTTATCAACATTGATAGCGAATTTGACCTGGAAAACATTGTAGCGGCTGCAAGAATTGCTGGAAAGAGGGTCAATGTTTTACTTCGAATAA ATCCTGATGTGGATCCACAGGTCCATCATTATGTTGCTACTGGGAATAAGAACTCTAAATTCGGCATTAGAAATGAAAAGCTGCAGTGGTTTCTAGATGC TGTGAAGGAGCATCCTAATGAAATAAAGCTTGTAGGGGCCCACTGCCATCTTGGGTCAACAATTACCAAGGTAGATATTTTCAGGGATGCTGCCGAGATT ATGGTCAACTACATTGACCAAATCCGAGATCAGGGCTTCGAAGTTGATTATTTAAATATTGGCGGTGGACTTGGGATAGATTATTATCATTCTGGTGCTA TCCTTCCTAAGCCTAGAGATCTCATTGATACTGTACGAGAGCTTGTTCTTTCCCGTGGTCTTAATCTCATCATTGAGCCAGGGAGATCACTCATTGCAAA CACCTGTTGCTTAGTTAACCGAGTGACGGGTGTCAAAACTAATGGGTCTAAAAACTTCATTGTAATTGATGGAAGCATGGCTGAACTTATCCGCCCAAGT CTTTATGATGCTTACCAGCATATAGAGTTGGTTTCCCCTGCCCCAGCAGATGCTGAAATATTTTCTTATGACGTGGTCGGCCCTGTTTGTGAGTCTGCAG ATTTCTTAGGAAAAGGAAGAGAACTTCCAACTCCAGCCAAGGGTGCTGGTCTGGTGGTTCATGATGCTGGTGCTTATTGCATGAGCATGGCATCAACTTA CAATCTAAAGATGCGGCCTCCTGAGTATTGGGTTGAGGAAGATGGATCAGTGAGCAAAATCAGACATGGAGAAACATTTGAAGACCACATTAGGCTCTTT GAGGGCCTTTGAAAAGAAGCACTCATTTTTTTTAATGGGAAAATGATGCTTGAGATTTGTAATTTGGGTTGGACTTTGCCAAAGAGTGCAACCAACACTT CTAGTTATGTTTCTTCCATCCTTGTTGAATGTTGTTACTCTTCATGGGAAATCTGCTTTAAAAGGAGTTCATTTAGATTTCAACACGGCATTTGATATGC TCCTTAATTATGCTCGGATAAAATATAAAAATTGTGTTAGACAGTCGACAATCAATGTTAGACTTTGTATGATCTCTATGATATAGATCAAGGAGGGGAT AATAAGTTGTGTAAACTTAGTTGGGTGTCATATTTATTAGACTTATTTCTTCCTAATTCACTATTGATTATTTAGATCCACATAGATCAATTTTCAGCTT GAGTCCATGGTATACCATCATAAGGCTTTCTTTCACCTTTACCTAATTGCCTGAAATTTGATCGTAGTTCAAGTTTTGGGTTTGATATGGTTATTTGTCA TGCACTATATTTTATTCTGGAG
• Tissue: pods
• Gene name: LI_gene_152668;
• Additional information: details;

Expression of Ll_transcript_476005

FPKM

• PAB: 3.3
• PNAB: 7
• PS1: 10.9
• PS2: 7.2
• PS3: 3.9
• PW1: 6
• PW2: 5.1
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476005

• Blastp: Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 78.03% of identity
• Blastx: Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 78.03% of identity
• Eggnog: Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)(COG0019)
• Kegg: Link to kegg annotations (AT5G11880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431286.1)
• Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain (PF02784.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;