| Id Trinity | TRINITY_DN47445_c4_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_476006 |
| Sequence | ATTCAATGTTTGGTTGTTGTTATTATATAGCCCCTGCGTGTTTCATTACAAATTCAATAAGGAACACAATAAATGAGAACGACACTGAGAGGGTTTTGAG TTTTGACCTGAGACTTTCTCTTACACTTGCAGCCTCACTGTTGTTTTTCAGGAACATCGATGGCGGCCTCACACCTCCTTTATCATTCTCCTTCCTTTCC AAAAACCTTAAATCACTCTTTGAACCAAAACTCTTTCGCCCGAAACCTCGTTCTACCTCTCAAAGCCACCTTTAAACCACTGGTTCTTAGAGCAGTTTTG TGTCAGAGTAACACTGCTAAACCCCAATTACATGACTCCCAGAGTACCACTAATTTTCAACACTGTTTCACCAAGTCTGAAGATGGGTTTCTGTACTGTG AGGGTGTTAAAGTGCATGAGATTATGGAATCTGTTGATAAAAGACCTTTTTATTTGTACAGTAAGCCTCAGATTACTAGAAATGTCGAGGCCTATAAGGA CGCGTTGGAGGGATTGACATCTATAATCGGTTATGCTATCAAGGCCAACAACAATTTGAAGATTCTGGAGCATTTGAGGCACTTGGGTTGTGGTGCTGTG CTTGTAAGTGGGAACGAGCTTAGGCTGGCGCTTCGTGCTGGGTTTGATCCCAAAAGGTTGAATCATACTCAACCCATGAATTTGTCTACGACTCTACATT TGTCGATGTATTTATGTTTTTAAGGATCTTTTCTGCATAGATATCATATGAGCTTTTTTTACCATGTCAGCTGCGTATAAAGGACCCCATTTGGAACTTT CTGACCTTTAGTTTAAAATTACATTGTTTGTCATTTCTCTGTAACTGGTTCTTTGAAACTTTTTCTCATAAAAATGTTTCATAATTAGTGTATTTATGGT CAGTAACTGAAAACATGGATGAATAGGTGTATCTTTAATGGCAACGGAAAACTCTTGGAGGATCTGGTCTTGGCTGCCCAAGAAGGTGTTTTTATCAACA TTGATAGCGAATTTGACCTGGAAAACATTGTAGCGGCTGCAAGAATTGCTGGAAAGAGGGTCAATGTTTTACTTCGAATAAATCCTGATGTGGATCCACA GGTCCATCATTATGTTGCTACTGGGAATAAGAACTCTAAATTCGGCATTAGAAATGAAAAGCTGCAGTGGTTTCTAGATGCTGTGAAGGAGCATCCTAAT GAAATAAAGCTTGTAGGGGCCCACTGCCATCTTGGGTCAACAATTACCAAGGTGGACATTTTCAGGGATGCTGCAACTATTATGGTTAACTACATTGACC AAATCCGAGCCCAGGGTTTTGAAGTTAATTATTTAAATATTGGTGGTGGACTTGGCATCGATTATCATCATTCTGGTGCTATCCTTCCTACACCCAGAGA TCTCATTGATACTGTACGGGAGCTTGTCCTTTCACGTAATCTTAATCTCATCATTGAACCTGGGAGATCACTCATTGCAAACACGTGTTGCTTAGTTAAC CGGGTGACGGGTGTCAAAACTAATGGATCTAAAAACTTCATTGTAATTGATGGAAGCATGGCTGAACTTATTCGCCCTAGTCTTTATGATGCTTACCAGC ACATAGAGCTGATTTCCCCTGCCCCAGCAAATGCCGAGGTTGCGAACTTTGATGTGTTTGGCCCTGTCTGTGAGTCTGCAGATTTCTTAGGAAAAGATAG GCAGCTTCCAACACCAGACAAGGGTACTGGTCTGGTTGTTCATGATGCTGGTGCTTATTGCATGAGCATGGCATCAACTTACAATCTAAAGATGCGGCCT CCTGAGTATTGGGTTGAAGACAATGGAACAGTGAGCAAAATCAGACATGGGGAGACATTTGAAGACCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_152668; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476006
| Blastp | Diaminopimelate decarboxylase 1, chloroplastic from Arabidopsis with 84.81% of identity |
|---|---|
| Blastx | Diaminopimelate decarboxylase 1, chloroplastic from Arabidopsis with 84.81% of identity |
| Eggnog | Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)(COG0019) |
| Kegg | Link to kegg annotations (AT3G14390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431286.1) |
| Pfam | Pyridoxal-dependent decarboxylase, pyridoxal binding domain (PF02784.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |