Ll_transcript_475641

• Id Trinity: TRINITY_DN47447_c0_g4_i2
• Name Transcript: Ll_transcript_475641
• Sequence: GTTTTGTCAAATGTTTGCTAAACCAGTGCATTGGTGCAAATTCTGTTGTAGGTGTGAATAGTGTGATATTAGCATTTTTAGGCTTCATGTTTGTAGAATC ATTTTGAATAGTAACAAGAGATGACACATAGTCTGTTAGACATGTATGGTTTTTTCTTGTGGCTGTTTACATTTTAAATCAACCTTGTCTTTTATTTTTT GTCGAAAACTTGAAATTATTTGGCTTATGCAAGGACCTAGGAATTGAGAGGTTGGTAAATATTTTTGTTGTCATCATTTTCTGTATATATTTTGTAAATA TTCTATGTTTCTAATAGTTGTTGACATTGTTGATAACTACTGCTGAGATTGCTCCATCAGCAGGTCTGTGATCAATTTTGAAGAGGTTGGTTGTAGAAGT GATGCTCCAAGGAATTCAATTAAAAACTCTGATGGACAGAGTGTTACAAATGATGTTGAAAGATATATTAGCAGACAAAATAGGAACAGAATGGACAGAA GAGACACTGGGGGCGGTCAAAGCAGCTATGGTGTATCTGGTTTTTTATTAGATCATGCAGCTCAGGCAACTTCACTGGTCATTCCTGAGGTAAACTACTC TACTGGAATACATCCTACAACAGATGTATCAACTACAAGGCAAAGGAAACGTGGATCAGCTTCAGGAAGTCGTAATGGCTCGTCTTACAATTCTGAAATT ATGTTCCTTGGTTCATCTGGGGAATCATCAAGATCATCCCGCAGACCTGTGTTGAGTTCTGAGGTGGTCGAGTTGTTATCTGAACCAAGGTCCAGCAACA GGATTTCCTTATTTGACAATGAGAACAATAGCTCAGATTCTCGGACCCAACAAGTAGAAGCAGATGAGATATTGGCACGTGAACTCCAAGAACAACTGTA TCGTGATGATTCTTTTGAAGGCAGAGGGATGTGGGTGCCAAGGGAACCTTCAAATAGGCAGCCTCGTCCACGGACTCGTCAAAATCCTTCAAATAGGAGA GCCATGCCTCAAGTTTCTTTGGCTAACAGAACTTCACAGTGGAGCAATCACACTATAAGACGGTCTCTTAGATATCACATATCAACCAGAGGAAGATACC CTCCATTTCCTCTAGACATGAGAGACAATGTATTGGAAGCATTCGAGGATGCAGTGGGGGGTCTTGGTGATATTGGAATGGTTGATGATATCTTTTATGC GGGACGTGATTTCAATGAAGAGGATTATGAAATGTTATTAGCTCTTGATGAAGGAAATCACCGTCATACTGGTGCAGCTTCCAATCAGATCAATGGCTTG CCACAGTCCACCGTCCAGACTGACAACTTCACAGAGGTATGTGCTGTATGTCTCGACACCCCGATGAAGGGAGAAACTATCCGCCACCTTCCTTGTTTGC ACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCGTAGGAAACCGTCATGTCCGGTGTGCAAGTCATCTATCACCTAATTCATTATGGCTTTTGAATG GTTAATCTATCATATGCTGTAGTTGATTATCTCAG
• Tissue: pods
• Gene name: LI_gene_152698;
• Additional information: details;

Expression of Ll_transcript_475641

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.3
• PS3: 0.7
• PW1: 0.7
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475641

• Blastp: E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 36.97% of identity
• Blastx: E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 36.97% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G55530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428353.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;