| Id Trinity | TRINITY_DN47447_c0_g4_i6 |
|---|---|
| Name Transcript | Ll_transcript_475665 |
| Sequence | GATACACCATTTCTTTCATGTACTTAAAAGGACATTATGCAAGATAGATAGAACGAATAATTTGTTGTATAGAAAGTAGAAAGTACAAATGAACGGGTTC GTCTTCTTAGGCTCTTATATCCAACAACATTCCTACCCGACCCGGATCATTTATTAATGGTTTCCATCCCAAGACGCTAGATTTGAACCTGAACCGTCAT AAATTCTCGTCTCTCCAATTTTCAAATTTTCAATCTCTCACACAGGATATGAAGGATATATATATGGATCAAATTGTGGATGTTCCTGATACACCTGATA GGTTAACTACCAGGTATGGTAATCGGAAATATGTTGCTAAACCTGATGTGGATATCATGTCCATGAATAAGGGGGATATGGGCTTTCTTGCTGCTGATGA AATTAATAACTGCAGCAATTATATAACATTGTCCTCATCAGAGAAATCTTGTCCTTCTGAAAATGGTCCTATGTTTAGGAGAGCACAAAGAGAGAAAATT TTAGGGCGTGGGACTACACACTCTAACGTGCCTAAAAATATGGATAAAGGGAAAACTGTAGTTTCCAACTCTCCTTGCAAATCATCCCACCATCGGCCTG TTTCTGTTTTACGTTTGAATGAAGAGAATGAAAAGTCTCAACAACTGAAATCAACTTTGTCAGATTGTGAATCAAGAAATAGTGCAACTGGAGACATGAA AGAGGCGAAAGCAAGCTTTGGGAATTCTTCATTTCCATTCATTGCTGATTCCTCTAATGAATATAGAAACGCCTTTAGAGGAAAGTGTAGTAAAACCCTT TCAGGTCCTAATACATCTGTGGACCATGGCAAGAGCATTGCTCTGTCTAGTGATTCTCATTGTCCACAAAATATTGAAAAGCAAGTGTCTTTGAATCCTC TTCTTTCATCTTCTCCTAGAGGTAGAGGGCAGAAGAGATTGGTACGAAATGGGTGCATTTCACCGCTTAATATTGCAACAAGGGCAAAACAATCAACTGG ACAGAACATTCATCAACCCTTTGACATTGAACAGAGTCATGCAGGGCATTCAGTTTCTAGCAATACAATATCACCAATTAGTGTAGATGATATAGTTGCT GAAGAGAAAGGAAAAGGAGTACTTATTCATCCTTCGTCCCTTGGACTTAATGCTGGAACTACTCACACAGCGTGCAGGTCTGTGATCAATTTTGAAGAGG TTGGTTGTAGAAGTGATGCTCCAAGGAATTCAATTAAAAACTCTGATGGACAGAGTGTTACAAATGATGTTGAAAGATATATTAGCAGACAAAATAGGAA CAGAATGGACAGAAGAGACACTGGGGGCGGTCAAAGCAGCTATGGTGTATCTGGTTTTTTATTAGATCATGCAGCTCAGGCAACTTCACTGGTCATTCCT GAGGTAAACTACTCTACTGGAATACATCCTACAACAGATGTATCAACTACAAGGCAAAGGAAACGTGGATCAGCTTCAGGAAGTCGTAATGGCTCGTCTT ACAATTCTGAAATTATGTTCCTTGGTTCATCTGGGGAATCATCAAGATCATCCCGCAGACCTGTGTTGAGTTCTGAGGTGGTCGAGTTGTTATCTGAACC AAGGTCCAGCAACAGGATTTCCTTATTTGACAATGAGAACAATAGCTCAGATTCTCGGACCCAACAAGTAGAAGCAGATGAGATATTGGCACGTGAACTC CAAGAACAACTGTATCGTGATGATTCTTTTGAAGGCAGAGGGATGTGGGTGCCAAGGGAACCTTCAAATAGGCAGCCTCGTCCACGGACTCGTCAAAATC CTTCAAATAGGAGAGCCATGCCTCAAGTTTCTTTGGCTAACAGAACTTCACAGTGGAGCAATCACACTATAAGACGGTCTCTTAGATATCACATATCAAC CAGAGGAAGATACCCTCCATTTCCTCTAGACATGAGAGACAATGTATTGGAAGCATTCGAGGATGCAGTGGGGGGTCTTGGTGATATTGGAATGGTTGAT GATATCTTTTATGCGGGACGTGATTTCAATGAGTAAGCTCCCAGTAAATAATTCATGCACATAAATGATGTTTCATTTTTGTATAATAATTTTAAGCAGG TTCCTGCTCATTGACTTCTCCAATTCTAGAAATTGGTTTGCAAGATTGCAATATTCTAATTAAGAACATATGTATATTTGTAATATTATTCATTTTTTTG GGTCGAATGGTTATAGGGATGTGTATTGAAAATTGTAGAAATCGTGATGCTTTAATCTTTGAAAAAAATATATTTTCCCTTAGTGGAGGACTAAATTATC ACTTTTCCGGAATAGGGACACCATTGATATAAGAATCAAGCCAGAAAAATGTTTCCCCTATAACCAATTATTTTCTTTAACCTCTACCAAAAGTGTGAAG GTTTTTCTTAATTTCAATAGTTTTTAAACTTCTCAATTTAAAATTTTTATTAGAATAGCAAACACAACTTAGATGGTAAAATAAAGGATGAAAGGAACTC ACTGTTATTAATAATGCGAACTTCGTCATCAGGGAAGGTGAAAGTTGTCTTTCCAATTATACATCAAAGTAACATTGCCTCATTTCAATACTCAAGCAGG ATGCCCCATAGTTTACGTAGGTCGGCATGTGTGTCTTTTCTTTCCCTTGATAGGTGGATTTAATCAAGTTCTTGTGTCTTTAGAGAAAGCTTTCATGGAT TTCTTATGTTTCGATATAAACAGAACACTAATTTGAGGTTCTTGCCTTTCTCATGATTTTGTGCAGAGAGGATTATGAAATGTTATTAGCTCTTGATGAA GGAAATCACCGTCATACTGGTGCAGCTTCCAATCAGATCAATGGCTTGCCACAGTCCACCGTCCAGACTGACAACTTCACAGAGGTATGTGCTGTATGTC TCGACACCCCGATGAAGGGAGAAACTATCCGCCACCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCGTAGGAAACCGTCATG TCCGGTGTGCAAGTCATCTATCACCTAATTCATTATGGCTTTTGAATGGTTAATCTATCATATGCTGTAGTTGATTATCTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_152698; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475665
| Blastp | - |
|---|---|
| Blastx | E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 37.1% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428361.1) |
| Pfam | - |
| Rfam | - |
| GO | - |