| Id Trinity | TRINITY_DN47448_c1_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_475482 |
| Sequence | TTCAACTTAGTGAGTCTATTTTGGTGCTTCAGCAGTGAAGCCTGGAGAGTCAATTAATATGTTTTGTAACATCTATTTGAGGGCAGAAGTTTCCTCATGA ACTTTTAGGCTGCTAGCTGTGAAGTATTAATTCCTTGTTAGTCACATATAAGGTCTTCCTATCTATTGAAAGAGGGTCTAATACTAATCTCAGGCAATTG AAAGTACTTTTATACAATTGGCTGCTGAGTAAAGAACTTTGCAGATGATCGTTACATGTTTGTGTATAAAATTTTATTCTTTACAGGAATGTGATTATCT CAGGGCTATAGCCCTCCCTCGCCTGAAAATTTCAACTGTGGTGGATACAAAAACTGGAAAGGGAGTTAAAAGTGATGTCAGGACAAGCTCTGGTATGTTT TTGTCTGTTGCAGAGAGAAAATATGCAATGGTACAGGTAAGTTATCAGGTTTATTTTTCCCCAAGTCTTTTGTCTCCCATCTTTGTTGTCAAGCCTGTTC TAAAGTGGTCTTTGTCTGATACACACTAAAACTCTGTTAACATATGACTTTACTGAAAATTATGGGATAGAATTCAATGAGTCCAACGGAGCTCAGCTCC TTGCAACAGAGGTATGCATCTGAAAATATAGATAAAACTGCAACACGGACCACAGGGAAACAGTAAACAACTGAGAGAAAAAGAAATTCTGGAATGGTCA CTAGAGATAGAGAGCTCTCCTCCCACAGGTCAAGGCTTTCCCATTCTAATTCTAAATTCTTCAGATACTCTGTCCCCTTCCAGCTCCTCCCATATATCAT TCCCCCATCAATGCACTCATGATTCTCCATTTCTGTGCCCCGATTCCCCTATAGTATGTTACTCATTTTCCCCTCCTCTCCATCTGACTCCCTTTATCAT ATTCAACTCTTTGTCCCTAACTTCTCCTTCTCTCATATACCAATAAGGCCTTTACTGTTATTAGGCCATCTTTTAGCTTCTCTCCTGTCCTTCTATACAC ATAGGTAAGTGGCCCATCAGCATAGAGCCAGACCAGCTCCTGCACTCCTTCCGGACCCTTGTTCGGTGGTTATGAGTGACCACTTTTGTTTTTAAACTCT GTTTAAGTTTCACACATAGGGTTTGAATGCTTCTCAATCATGAATAGGGCACTGTTCACAGTTAATTCATAAATCTGATCATCTACAAATGGAAAGCATT ACAATTGAATTAACCATTTTATCCTACAAGAACTAGCAATTGAGTCCTAGTTCTACAACGATTGAGATCCAACAATTCCATAAACAAAACTTGGGAGTTA GAAGAAAGCTCAATAATACATTGGTGCAAACCAAAATTCAGTAAATGTGATTCAGTAACCTTGTTGAGTTAGGGTAAATAGCAACTTATTAAGGCTAGTA ACCCTAAATAGTAATCTTGTCAGATAAAACAGCAAGCCCAAGGTAAAATGTCTGCCTTTGGACCTTTGGATGCTCCATTCAACATTTCACATTTTTTATT TTTTTAATTCTTATACTAACACAGATGGAAATAGTACAATAATTAGACAAAAATAGTACTTATTACATCCATTTAACCAATGATAACTTATAAAACATTG CTTTTGTCTTTTAATTTGAGGTTTTTATTTTATATGTTGTTTTCGTGTCTTATAATTTTTAAAACTTGTCGTAACCTCGTGCCACTATTGTGTCATATCC ATGTCCCAAAATAAAACTAAAGCAAAACACCTTAGATGATTTGATAGCAACATGTATGCTTTGACTCGAGTGGGACCTTGATCGATTAGTAATATTGAAT TTATTTTTGTATATTCTTTTATGCTCCTTCGTCCTTTTATAAAATTGTTTTTCTTATGTATAAATGTAGGAAGAGTACAAAAAACATATTTTATTGGCGA TCATTAAGTGTACACTCTGCTAAAAACATGCTCACCTTTGTTAACTAGGCAATTGAAAAAAGAATTTCTGTCTATGCTCAAGTACCAATTGAAAATGGAG AGCTTATACAAATCTTGAGGTGAGGATATGACTTGTTTTCTTTACATTATATCTGAACAAGAAAGACGGGTTTTGCTAGTTTCAAGCGTAACATCTGCAG CAGCACAGGTATGAGAAGAATCAATTTTACAAACCTCATCATGACTATTTTTCTGATACTGTAAGTTGTACCCCTCTCTTTGCAATTTTTACTGTTATAC TAAGCATAAGAATTGGTTGAAGTGGCTCCTTTGCAACCCTTTGTGCCTTCTTTTCTGGTACAGTTCAACTTGAAGCGTGGTGGGCAGCGAGTAGCTACAA TGCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_152704; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475482
| Blastp | - |
|---|---|
| Blastx | Prolyl 4-hydroxylase 1 from Arabidopsis with 70.91% of identity |
| Eggnog | prolyl 4-hydroxylase(ENOG410XS5J) |
| Kegg | Link to kegg annotations (AT2G43080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014513824.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |