Ll_transcript_475427

• Id Trinity: TRINITY_DN47449_c1_g1_i8
• Name Transcript: Ll_transcript_475427
• Sequence: AATATTCATGTTTTTATTTATTTTTTCTTTATTCTGATTGGCTTGGTACATGGTTGAGGACATATTTGGGGAGGAGAAATCTCTATCAATAGTTGACACG ACTTAACTTAGAAGTCTTAGCAAAACCTCATGCATTTTATTAGTACGAAGATCACCTGTCCCAAAGTATGTCCTCAACTATGTACCAAACCAATCAATCA GAATGAAGAAAAAATAAATGAAAATATGAATGTTTAATTTTTTTGACTGACGTGACATGTTGTTATTAATTTGATACAGACTTTGGGACAAGGTTTGGGA CAACAGATCCTGGTCCTTTTATTATACTATGACTCTTATTTGGTTTGTCTCTTGGTTATTAATATTTCACGGCATTGGTGTGTATTATGTTATGATTTTT CTTTTGCTATTTCTCACAGCTTACATGCTCCAAGATCAGGAGGTGCATGCTGCAGAGCTGGAGCGTACCTTCATTGCTATTAAGCCTGATGGAGTGCAGA GAGGACTGATTTCAGAGATTATTTCACGTTTCGAGAGAAAAGGGTACAAGCTCGTAGGAATTAAAGTACTGACTCCTTCGAAGGAATTTGCCCAGAAGCA TTATCATGACCTAAAGGAAAGACCCTTCTTTGGTGAGCTATGTGGATTCCTAAGCTCTGGTCCTGTTATTGCAATGGTTTGGGAAGGACAGGGAGTTATA GTGTATGGCCGGAAACTAATCGGAGCCACGGATCCACAGAAATCAGAGCCCGGAACTATCAGAGGTGATCTTGCTGTTAATGTTGGAAGAAATATCATCC ATGGGAGTGATGGTCCAGAAACTGCTAAGGATGAGATTAAGTTGTGGTTTAAGCCAGAGGAGTTAGTTAATTACACCAGCAATGCCGAGAAGTGGATTTA TGGTGCCAATTGATTATTTTCCTCACCCATTTTGACTTTCCATCTTGCTAGCATAAGGAATGAGAAGGGAAGCATGATTTTTGTAATAAATTATTTGTCT CTCGTGAGAACCAAAATGTGAACAATGACCCTATAAGCCATGAATAAGTGGAAATGAGAACAATTCGTTAGCCCTAGTATATTTATTTCACTATATTGGG AATTAGGAATTACATTATTTCATCTCTCACATGAAGACTATCTACTTCAATTTCTGCGCTAGTTACTTCAATGCCAACAAGGATCTGTTGTCCCAAAGCC TATTCTAAACGAAAGTAACATGCCA
• Tissue: pods
• Gene name: LI_gene_152709;
• Additional information: details;

Expression of Ll_transcript_475427

FPKM

• PAB: 0.9
• PNAB: 0.8
• PS1: 0
• PS2: 0.9
• PS3: 0.5
• PW1: 3
• PW2: 3.4
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475427

• Blastp: Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial from Arabidopsis with 84.57% of identity
• Blastx: Nucleoside diphosphate kinase III, chloroplastic/mitochondrial from Arabidopsis with 84% of identity
• Eggnog: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity)(COG0105)
• Kegg: Link to kegg annotations (AT4G23900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444631.1)
• Pfam: Nucleoside diphosphate kinase (PF00334.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;