Ll_transcript_475043

• Id Trinity: TRINITY_DN47456_c0_g2_i1
• Name Transcript: Ll_transcript_475043
• Sequence: CAACAATGGATAATTATATATAGAGTCACATGTTTGCACTCACTCAATTTGAGTGGTAATGATAATGAGATAGAGATATACATGGCTCTCTCTCTTACAA TCTCAGTCCCTTTCCCACAACTACAACAACGTTTCCCTATTCTCTTCAAACCAAAACCAAAGCCAACTCTTTCTTTCATTACTTCTTCATATTCCTTACC TGATTTCAAAGTGGGTCAAGATTTACCACCTAACTACGCGGATTGGCTTCCTAAACCTGACCCTAAGCATCGCAGAAGAGCTGGTATTCTACTCCATCCG ACGTCGTTTCGAGGCCCTTATGGGATCGGTGACTTTGGTGATGAGGCCTTTCGTTTCATTGACTGGCTTCATTACTCTGGTTGCTCCCTTTGGCAGGTGT TACCTCTAGTGCCTCCTGATGGAGCTGGATCTCCTTACTCTAGCCAGGATGCAAATTGTGGCAACACTCTCTTGATCTCTCTCGAACACCTTGTTGAGGA TGGCTTGTTGGAAAAGCATGAGCTTCCTGAACCAATTGAGGCCGAGCAAGTGAATTTTTCAGTGGTTGCCGATCTTAAGAATCCTTTGATAACTAAAGCT GCAAAGAGGCTCATATCGAGTGAAGGGGAGCTCAAAAAAACAGCTTGAGACTTTTCGTAGAGACCCTACCATATCAAGCTGGCTTGAAGATGCAGCTTAT TTCGCTGCTATTGATGACAGTTTAAATGGAATCAACTGGTACGATTGGCCTGAACCTTTAAGAAACCGCCATCTTGTAGCTCTAGAAGATATTTGTCAAC AAAAGAGAGACTTTATAGATGTATTTATTGCCCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTTGCAACTACGCACAGAGCAGAGGAGTCAGTAT AATGGGAGATATGCCTATTTATGTGGGTTATCATAGTGCGGATGTTTGGGCAAATAAAAATCAGTTTTTACTGGTTAGTGGTTTCTAAAGAATTTAGCTG TCACTCTGAAGTATGAAGTGTGATCTAACCTTTTTTCAGAGCATTTTGTACCTTTTCATTTCAAAATATTCTCTATTTGTCTTACAGAATAGGAAAGGTT TTCCTCTTTTAGTTAGTGGTGTTCCACCTGATGCATTCAGTGATACTGGTCAGCTGTGGGGCAGGTTTGATGTTAATCCTATGATAAATGTCTTTCCATA TCAGTCTTACTACCTGAACCTTTTCCATGTTTGCTATTTAATCAAGTCCTAATTTTGACATAAATTTCCTTTGTTTTCTGTGAAGATGTCTGATTATTCT GTTATCATGGTCAGCAAGACATCTCTCATTTTCATTTTAGATTTTTAGTTCATTTCATCTTTCCGTGCTTCTTTAACCATCTATTACAATATATCCTGTC TGATTATTTCTGTTTTCAGCATTTTCCCTTAGTCTACACTTCTTTTTTGGTAATAGATGCTAACATGTTGTGAAGCACCTTGTAAAAGGTCTCTCATCTC TTTTGATTATAGATTTCTTATCTTTTCTTATTTTCTCGTTTTAATGAAAAAGCCCTCTGTATGATTGGAATGCCATGGACAAAGAAGGATACTCATGGTG GATACGCCGCCTCCGGCGTGCACAGGATTTATATGACGAATTTAGAATTGACCACTTTAGAGGATTTGCTGGATTTTGGGCTGTTCCTTCTGAAGCAAAA GTAGCTATGGTTGGGAAGTGGAAGGTTGGACCTGGGTTATCTTTCTTTGATGCCATTTTCAGAGCTATTGGAAGGATTAATATTATAGCAGAAGACTTGG TATGTTTTATTATATTTTATTAATAACTTGAAAATGTTCCAACTTTACTCTAGGGATGTGCATAAACAATTTGTGAATCAAATCAAACTTAAAATTGGAC TTAACCAAACCACAAAATAACCGGACCTGTAAATCAATTAACCAACCAAACCATTTTTTTCCAATTCGGTTCACCAATCCGAACCTTCTGCTATTGCAAT ATGATGAGCCTATACTTACCAAACACAACAGAAAAACGATATGAGAACCCAACCCATTGCTTCAGATATTAAACGTAACCCCCAATCATGTTAACCTCTT CATCTTTACTGTTTCATTTCTACTATACATCAAAGTTTCAATAAATATCTTTTGGAAAAGTTGAATACATAGTCACCTGCTTAAACTGTGATGTGAATTT TATTAATTGGACACAGTCTTCTACCCCATTAGAGTGTGTGATGTGAGTTTTATTAACTAGCTGCCATCTTTTATGCATTGTAACAAACCAAGTTATTTTC TTATTTGAGTTTATGTTTGAGTTAAACCATAGTTTCCCATTTGAGATTTAATATTAGTGAGCGTGTGTACATTTTCAAAGTGTCACTCACTTTTTGGACA GTGTAGGAAGAAGTTTTTTATTCACTTGGTTAGTTAGTTATTATCATTATCATATTTTATAATTTATGAAATTTCAGTCTGATACATTTTTCTTTTGTTC TTTTGGTGCATACTTGATCATGGTAGATGTTATCACATTCTTCAACTCCTATACTCAGACCAATGCGAAAACTTGGTGAAATTTCATGAAGAATTAGATT TAGAAGTTAGCTATTAAGCAAGTATAGTTATCTTCCTGAATTAGATAGGGCCATGCCATGTGTTCAAGGAAAAGTTGGTTAACTTATCTTGTCTCCTGAT TTCCAATGCAAAACAGCACCACTTGTATGAACCAATGGGTTATCAAGATGACGTTATGACATGGAAATTACTAAATAAGATCTTATATCCATAAGATCTT GTAAGATCTCAAGGATGAGAAAGGATCTAAAAAACCAAAATGTTTTGCAGCTTACAAACAATAGATTTAAGTAGCTCATTTTGAAAACTGAAACAAACAG ATGTGCAAACAAACTGGATGAAGAGGAAATTTGATGTACTTCAGAAGAAAGGAATTGAAATTGATGACGAGATTAGGGTTCTTAGAGGTGATTGGGTTCT GATCACATGTTGATGTTCAGTTCAGTTGGTATAGGTTCACCAAATTGAAATTGCACTAGAAAAACATTTTGGATTGCTGAACCAATTTTGGGAAAATTGT TTGGCTCATGAACTATTTTACAAGTTTGGTTATTTTTGTGGTTTGTTTCACACATCGTTTTTTATACACCTGACTTTTCATTCACATATGACTCTTCCTG AGGCATACTCCTGTAATTGTTTGGGTTTGTGATTTATGGCAGGGAGTTATCACTAAGGATGTAGTCCAACTAAGAAAGTCCATTGGAGCACCTGGAATGG CTGTTCTCCAGTTTGGGTTTGGAGGTGATGCTGATAATCCTCATCTGCCTCATAATCAGGAGTGCAATCAAGTTGTTTATACAGGGACTCATGACAATGA CACTGTAAGTATTTCTTTTACCTTACGTTTGTGGTTTGCACTGTTAGTTTATTATATCTCTTGGCTGTTTTATTTCCTTATTTCTCTGCTTCAGATTAAA GGTTGGTGGGAAGCTTTGAAGCCAGAAGAGAAATCCAATGTGGGTGCTATATTTAGTAGTCAAGTGTTCTTTTTCAATAAGTTTGATTATAGTTCATCCT GTTCCTTGTTTATATGTTTCAGGTGTTAAGTTACCTTTCACTAACAGAGGAAGGTGACATTTCGTGGGCTCTAATCAAGACAGCACTAGCTTCTGTTGCT CAAACAGCAATAATACCTATGCAAGATGTTCTTGGATTGGGAAGTTCTGCAAGGATGAATACTCCTGCAACTCAGTTTGGAAACTGGGGTTGGAGAATTG CAAGTTCTGTGAGCTTTGATAGCTTGGAGAAAGAGGCAGAAAGACTTAAAGAGATGCTTTCGATGTATGGCCGGCTTTGAATATGGAAATTCTCCTTTGA TAATCAAGAGGAAGAGTTTGCTCTGTAAGGCGAACCGAAGCTGCCGAGCCTGAAGTTTATTCCCAAGTTGCTAGAGTATGAATGATGCTGATCAATCAAT GCTGGGTTGTCTTATGTT
• Tissue: pods
• Gene name: LI_gene_152749;
• Additional information: details;

Expression of Ll_transcript_475043

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0.5
• PS2: 0.3
• PS3: 0.3
• PW1: 0.4
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475043

• Blastp: 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic from Arabidopsis with 65.29% of identity
• Blastx: 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic from Oryza sativa with 52.51% of identity
• Eggnog: 4-alpha-glucanotransferase(COG1640)
• Kegg: Link to kegg annotations (AT5G64860)
• CantataDB: Link to cantataDB annotations (CNT0002507)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430233.1)
• Pfam: 4-alpha-glucanotransferase (PF02446.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;