Ll_transcript_475074

• Id Trinity: TRINITY_DN47456_c0_g2_i13
• Name Transcript: Ll_transcript_475074
• Sequence: CAACAATGGATAATTATATATAGAGTCACATGTTTGCACTCACTCAATTTGAGTGGTAATGATAATGAGATAGAGATATACATGGCTCTCTCTCTTACAA TCTCAGTCCCTTTCCCACAACTACAACAACGTTTCCCTATTCTCTTCAAACCAAAACCAAAGCCAACTCTTTCTTTCATTACTTCTTCATATTCCTTACC TGATTTCAAAGTGGGTCAAGATTTACCACCTAACTACGCGGATTGGCTTCCTAAACCTGACCCTAAGCATCGCAGAAGAGCTGGTATTCTACTCCATCCG ACGTCGTTTCGAGGCCCTTATGGGATCGGTGACTTTGGTGATGAGGCCTTTCGTTTCATTGACTGGCTTCATTACTCTGGTTGCTCCCTTTGGCAGGTGT TACCTCTAGTGCCTCCTGATGGAGCTGGATCTCCTTACTCTAGCCAGGATGCAAATTGTGGCAACACTCTCTTGATCTCTCTCGAACACCTTGTTGAGGA TGGCTTGTTGGAAAAGCATGAGCTTCCTGAACCAATTGAGGCCGAGCAAGTGAATTTTTCAGTGGTTGCCGATCTTAAGAATCCTTTGATAACTAAAGCT GCAAAGAGGCTCATATCGAGTGAAGGGGAGCTCAAAAAACAGCTTGAGACTTTTCGTAGAGACCCTACCATATCAAGCTGGCTTGAAGATGCAGCTTATT TCGCTGCTATTGATGACAGTTTAAATGGAATCAACTGGTACGATTGGCCTGAACCTTTAAGAAACCGCCATCTTGTAGCTCTAGAAGATATTTGTCAACA AAAGAGAGACTTTATAGATGTATTTATTGCCCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTTGCAACTACGCACAGAGCAGAGGAGTCAGTATA ATGGGAGATATGCCTATTTATGTGGGTTATCATAGTGCGGATGTTTGGGCAAATAAAAATCAGTTTTTACTGGTTAGTGGTTTCTAAAGAATTTAGCTGT CACTCTGAAGTATGAAGTGTGATCTAACCTTTTTTCAGAGCATTTTGTACCTTTTCATTTCAAAATATTCTCTATTTGTCTTACAGAATAGGAAAGGTTT TCCTCTTTTAGTTAGTGGTGTTCCACCTGATGCATTCAGTGATACTGGTCAGCTGTGGGGCAGGTTTGATGTTAATCCTATGATAAATGTCTTTCCATAT CAGTCTTACTACCTGAACCTTTTCCATGTTTGCTATTTAATCAAGTCCTAATTTTGACATAAATTTCCTTTGTTTTCTGTGAAGATGTCTGATTATTCTG TTATCATGGTCAGCAAGACATCTCTCATTTTCATTTTAGATTTTTAGTTCATTTCATCTTTCCGTGCTTCTTTAACCATCTATTACAATATATCCTGTCT GATTATTTCTGTTTTCAGCATTTTCCCTTAGTCTACACTTCTTTTTTGGTAATAGATGCTAACATGTTGTGAAGCACCTTGTAAAAGGTCTCTCATCTCT TTTGATTATAGATTTCTTATCTTTTCTTATTTTCTCGTTTTAATGAAAAAGCCCTCTGTATGATTGGAATGCCATGGACAAAGAAGGATACTCATGGTGG ATACGCCGCCTCCGGCGTGCACAGGATTTATATGACGAATTTAGAATTGACCACTTTAGAGGATTTGCTGGATTTTGGGCTGTTCCTTCTGAAGCAAAAG TAGCTATGGTTGGGAAGTGGAAGGTTGGACCTGGGTTATCTTTCTTTGATGCCATTTTCAGAGCTATTGGAAGGATTAATATTATAGCAGAAGACTTGGT ATGTTTTATTATATTTTATTAATAACTTGAAAATGTTCCAACTTTACTCTAGGGATGTGCATAAACAATTTGTGAATCAAATCAAACTTAAAATTGGACT TAACCAAACCACAAAATAACCGGACCTGTAAATCAATTAACCAACCAAACCATTTTTTTCCAATTCGGTTCACCAATCCGAACCTTCTGCTATTGCAATA TGATGAGCCTATACTTACCAAACACAACAGAAAAACGATATGAGAACCCAACCCATTGCTTCAGATATTAAACGTAACCCCCAATCATGTTAACCTCTTC ATCTTTACTGTTTCATTTCTACTATACATCAAAGTTTCAATAAATATCTTTTGGAAAAGTTGAATACATAGTCACCTGCTTAAACTGTGATGTGAATTTT ATTAATTGGACACAGTCTTCTACCCCATTAGAGTGTGTGATGTGAGTTTTATTAACTAGCTGCCATCTTTTATGCATTGTAACAAACCAAGTTATTTTCT TATTTGAGTTTATGTTTGAGTTAAACCATAGTTTCCCATTTGAGATTTAATATTAGTGAGCGTGTGTACATTTTCAAAGTGTCACTCACTTTTTGGACAG TGTAGGAAGAAGTTTTTTATTCACTTGGTTAGTTAGTTATTATCATTATCATATTTTATAATTTATGAAATTTCAGTCTGATACATTTTTCTTTTGTTCT TTTGGTGCATACTTGATCATGGTAGATGTTATCACATTCTTCAACTCCTATACTCAGACCAATGCGAAAACTTGGTGAAATTTCATGAAGAATTAGATTT AGAAGTTAGCTATTAAGCAAGTATAGTTATCTTCCTGAATTAGATAGGGCCATGCCATGTGTTCAAGGAAAAGTTGGTTAACTTATCTTGTCTCCTGATT TCCAATGCAAAACAGCACCACTTGTATGAACCAATGGGTTATCAAGATGACGTTATGACATGGAAATTACTAAATAAGATCTTATATCCATAAGATCTTG TAAGATCTCAAGGATGAGAAAGGATCTAAAAAACCAAAATGTTTTGCAGCTTACAAACAATAGATTTAAGTAGCTCATTTTGAAAACTGAAACAAACAGA TGTGCAAACAAACTGGATGAAGAGGAAATTTGATGTACTTCAGAAGAAAGGAATTGAAATTGATGACGAGATTAGGGTTCTTAGAGGTGATTGGGTTCTG ATCACATGTTGATGTTCAGTTCAGTTGGTATAGGTTCACCAAATTGAAATTGCACTAGAAAAACATTTTGGATTGCTGAACCAATTTTGGGAAAATTGTT TGGCTCATGAACTATTTTACAAGTTTGGTTATTTTTGTGGTTTGTTTCACACATCGTTTTTTATACACCTGACTTTTCATTCACATATGACTCTTCCTGA GGCATACTCCTGTAATTGTTTGGGTTTGTGATTTATGGCAGGGAGTTATCACTAAGGATGTAGTCCAACTAAGAAAGTCCATTGGAGCACCTGGAATGGC TGTTCTCCAGTTTGGGTTTGGAGGTGATGCTGATAATCCTCATCTGCCTCATAATCAGGAGTGCAATCAAGTTGTTTATACAGGGACTCATGACAATGAC ACTATTAAAGGTTGGTGGGAAGCTTTGAAGCCAGAAGAGAAATCCAATGTGTTAAGTTACCTTTCACTAACAGAGGAAGGTGACATTTCGTGGGCTCTAA TCAAGACAGCACTAGCTTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGATTGGGAAGTTCTGCAAGGATGAATACTCCTGCAACTCA GTTTGGAAACTGGGGTTGGAGAATTGCAAGTTCTGTGAGCTTTGATAGCTTGGAGAAAGAGGCAGAAAGACTTAAAGAGATGCTTTCGATGTATGGCCGG CTTTGAATATGGAAATTCTCCTTTGATAATCAAGAGGAAGAGTTTGCTCTGTAAGGCGAACCGAAGCTGCCGAGCCTGAAGTTTATTCCCAAGTTGCTAG AGTATGAATGATGCTGATCAATCAATGCTGGGTTGTCTTATGTTTCGAAGGTTCCTCAAACAAAAGAACTGAAAATAACTTAAATTGTATGCATGATGAG GAGTTCGGAATTCAAACATTGATTTCTTTATGTGATTCAAAGGATAAGAACCCAAGAAATTTGGCATAAATGTGTGCAAAAAGCTAGTCCTATCCCCTGA AAACAAAATAAATAAATAATGTTGAGAGTGGGATTTGAACCCACGCCCTTTCGGACCAGAACCTTAATCTGGCGCCTTAGACCAACTCGGCCATCTCAAC GTTTTTGTTATCGGGTTGCATTTAATAATATTTGAGTTCTAC
• Tissue: pods
• Gene name: LI_gene_152749;
• Additional information: details;

Expression of Ll_transcript_475074

FPKM

• PAB: 6.2
• PNAB: 8.9
• PS1: 8
• PS2: 7.4
• PS3: 8.1
• PW1: 8.5
• PW2: 8.7
• PW3: 8.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475074

• Blastp: 4-alpha-glucanotransferase, chloroplastic/amyloplastic from Solanum with 68.92% of identity
• Blastx: 4-alpha-glucanotransferase, chloroplastic/amyloplastic from Solanum with 63.23% of identity
• Eggnog: 4-alpha-glucanotransferase(COG1640)
• Kegg: Link to kegg annotations (102595076)
• CantataDB: Link to cantataDB annotations (CNT0002507)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430233.1)
• Pfam: 4-alpha-glucanotransferase (PF02446.16)
• Rfam: tRNA (RF00005)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;