Id Trinity | TRINITY_DN47457_c1_g1_i5 |
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Name Transcript | Ll_transcript_476198 |
Sequence | TATTAACCAGTTTTTCACCGGTGAGAGAATTTAATACACCAAATCTTTAACCCAAATAAAGGGAATTGATCACAACCTGCAACCTCCCCAGTCCCTTATT TTTATACTCAAATCATGCATTTCTTCCTGCACCAACCCCATTCGTCATAACAGAGATCAGTTGTCCCAAAAAACTATGTATCTTTGTCTCTATCCAATCA AGTTACCCTAAATAATATAATTATGCTTTTATGACTTTTCTATTTAATTAAATGACTCATTTTAATCGGTCTGGAACACCAAGAGGAGGAGGAGGACATA GATCTCCATTCATTGGCCCCCCCCTATACCTTCCCTCTCTTTCATCCCCACATATTATACCTCACTAGCTGCACTATTTTTTTTCATGCCCCAAACTACA CATGTATATATATAGCCTCATACATATAATCTTAATTCAGGCTATTATTATCCCAGTTTCTCAGAAAGGAAAGCTTTTCTGGTTTGAAGACAACCTGGTT TTTGAAGATTTGTGTGTGTTTGCTAGAACATAGTAAATAGTCATTGAATATGGCTGGTATCTTGTCTTTGGTAACAGGGAAGGCAGGGCCGAGTGGATTT GGATCAGCCTCAACTGCAGAACATGTTACTGATGGAATTGATGCCAGCAACCTCACTGCAATTATCACAGGAGGAGCAAGTGGCATTGGGTTAGAGACAG CACGGGTTCTGTGTCTTAGAAAAGCGCATGTCATTATAGCTGTGAGAAACATGGACTCTGCAAAGGAAGCTAAAAAGCTTATACTACAAGAAAATGAGTC TGCAAAAGTGGATATAATGAAGCTTGACCTATGTTCATTGAAGTCTGTTAGATCTTTTGTGGACAAATTCATTGCTCTTGATCTTCCTCTAAACATCTTA ATAAACAATGCAGGAGTTATGTTCTGCCCTTTCCAGCTTTCACAGGATGGGATTGAGACTCAGTTTGCAACAAATCATCTTGGTCATTTCCATTTGACAA ACCTTCTACTTAACAAAATGAAACAAACTGCAAAAGCCACTGGAATTGAAGGAAGGATCGTAAATTTGTCATCAATTGCACACACCTATACTTACGAAGA AGGCATTCGATTCGATGCCATTAATGATCAATTTGGTTATTCAGACAAGAAAGCTTATGGACAATCCAAATTAGCCAACATACTGCATGCAAATGAGCTT TCTCGTCGCTTGAAGGAAGAAGGTGTGAACATCACAGCCAACTCGGTTCACCCAGGAGTGATAATGACACCTCTTATGAGACATTCCTCTTTACTTATGA GTAAGTCAATTGCCACACAAGAAACAGATATATTTTAGATATTAAAAAAAGTAGTTGAATGTTCTTTTCTATATTTATTTTTCTAACAATCATACCATTT CAAGCAGATTTTCTGAAAATGTTTACTTTTTATATATGGAAGAATGTCCCACAGGTATATTCTCTTTCACTTGCTCCTAGCTTTATTATGGAAAAACAAC ACCCATAAATGATTTCACTCCCACAATTTTTATAAAAAATTTAGGCCCACATAATAAGATTGTATTTGCCTTTATTACTTTTCAAATTCATTGTATTAAT TATTCCATTGCACACGTAAATTTCTTTAATATTTTGGGTTTTGCAATATAATGATTTTATTTTATTGTCACTGCATAATTAAGATAAGGGTATTACATTA AATATATACAAGGTCTAAGGTTTAAATTAAAAAGGTGGTCCAAAAAATAATTATTATTTTTTGACTTAAATCCCACTGAGTAATTATAACTAAACAAGAA AAGATAATGTATTTTAGTTCTCAACTATTTGTATGACATCCCTTTCTTCAAATTTTATACTCACTCTTATCAAGCATTCACAATTTGTTTGGATCTTAAT TTTTCTCAACTTTGGCATAGAAAATTTAAATAGTTATTTTTTTAATATAATACCTATGCATTATTAGTATAAGGATTTAGCTATATTGTAACTATCTTTT AAAAGTCAATAATAACAAAACTTAAATGCTCGATAATCAGTGACACTGTACTCATATATTTTCAATACATCTATTTTTCTCAATTTTATATATTAAGGAA TGCCCTCAATTTTGTTTGATAAAATTGAGGGCCCTCACTTTTTTTCTCATGCTAGCACCAGCACAAAGGGTAACTATATTCGAGTACAAAATCATGCAAA AGTTATTTTCTAATTTTGACCCACAGGGAGCTGCTACCACATGCTATGTTGCTCTCCACCCAAGCTTGAAAGGGGTAACTGGGAAGTATTTTTTGGATTG CAATGAATTTGAAGCAAGTTCATTTGCCAAAGACAAAATCTTAGCAAGTAAACTCTGGGATTTCAGCAACAATTTTATCAAATCACTATCTAAAGCTTGA TTGCACCTATTGCTCTGGTGTTTTCCCAAACCACCCTTGTCTTGGTCATTAATTATTAATTGGTGTACCAAAAACTGGTTATGCGTCACTATAGTGATTA ATAGTTATATCATATGTGTATGCCCAAACATTTTATTATTCCTAGTTATCATTGTCTTCTTGTCCCCTGTTATTAATTATTTTTCTTGGCAAAATATCTC TGGGTATGTTTTATTTGCTGAATATATAGAGATCTCTTATGGATCAAACATTCATTTTTCTAAAAATCAAGAG BLAST |
Tissue | pods |
Gene name | LI_gene_152761; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476198
Blastp | Short-chain dehydrogenase TIC 32, chloroplastic from Pisum with 63.18% of identity |
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Blastx | Short-chain dehydrogenase TIC 32, chloroplastic from Pisum with 63.18% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426534.1) |
Pfam | short chain dehydrogenase (PF00106.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |