Ll_transcript_476362

• Id Trinity: TRINITY_DN47458_c5_g7_i1
• Name Transcript: Ll_transcript_476362
• Sequence: CTCCAAGTCCAATCTTCTATCATAGTTTATAGGTTATTATTGTATCCATACCCATTACACATTGTTCGTTTTTTTCTGTTCCGCCTCCTTCTTATTCACT CAGTAGAGAACTCAAAAAAACATCAACACTATGTATCGCGTTCTCCACCGCAACTTGTGTACCTTAATACAGCCCACCACTGCCGCCGCCACCACTGCCG CTGCCACCACTGCCGCCGCCACCACTGTCACCGCCGATACTACCGTAACCAGCTTCAAATCCATATCTCAGGATATCTTCAAAGAACAAAACTTCAAACG CCTTGTGGACAAGTTCAAGAAAGCCTCCGACATCGACAGCTTCCGAACAAAAAACAGTTTTTACGGCGCAATCGTTCGCCGCCTTGCCGTCGCCAAGTGT TTCAACCTTGTCGAGGACATTCTCGAGCACCAGAAACAATATTCAGATATCTCCAAGGAAGGCTTCAACGCACGCCTCATCACTCTATATGGCAAATCAG GAATGCATAGAAATGCACGCAAGGTGTTCGACGAAATGCCAGAACGAAACTGTACCCGCACGGTACTCTCTTTCAATGCCCTCTTAGCGGCTTATCTCCA CTCAAGCAAGTTCGAATCGGTTCATCGCCTTTTCAATAAGCTTCCCGAGGAGCTCTCCATTGAACCTGATTTGGTGTCATATAACACTGTCCTTAAGGCT TTGTGTGAAAAGGGTTCTTTTGATTCTGCGTTAAGCTTGATCAGCGAAATGGATAAGAAAGAATTGAAACCTGATTTGATCACGTTTAATACCATGCTTG ATCAATTGTACTCAAAGGGTCGTTTCGAGGACGCTGAGAAAATTTGGAACCAAATGGATGTGAAGGGTGTTGAACCTGATATTAGGAGTTACAATTCTAG GTTGGTGGGTTTGGCTTTGGAGAAGAGAACAAATGAAGCTGCTGATTTTCTTGTGGAAATGGAGAAAAAGGGTGTCAAGTCTGATATTTTTAGCATCAAT GCTTTGATTAAAGGTTTTGTGAATGAGGATAATTTGGATGAAGCTAAGAAATGGTATGGTGAAATAGCAAAGTCTAGTTATGACCCTGATAAGACTACTT TTGCGACCTTTGTCCCCTTCCTGTGTGAGAAAGGTGAATTGAAACTGGCAATTGAGGTGTGCAAGGAGTTCTTCAACATTCAGTGCCGTGTTGACGTATC ATTGCTGCAGCTTGTGGTGGATAAGCTGGTGAGTGAGTCCAGGATTTCAGAAGCGAAGGAGATTGTAGAACATGCGAAAACCAATAGGTACTCACGCTAT AAACTGAATTTGCCAGCAGCTGAATAGAGCGTAGTAGCATATCAATTTGTTTTTTTGTTGTGTCTATTGTTAATCTTGCACTTTAAATGTTATGTTACAA TGGTGAATTGGATATTGCCACCAAGAATTGGTTTTGTTCTTGTTTGGTGAGCTTAGTAACTGATTTACTTGAAGATGGCATTCACTGTCATTGCTTTTAG ATATTAGCCACAAAATTGAGAGCATTTCCTCCTCTCATTTCTACTAGGTGAGAGCATTTCCTGAACTTATTTTTTTCTCCCCCTTATATATTTGGTGAAG CATTTCCGACCAACTTTTCCTTCTTTCTTTTAGTGGTAATAGAATTGGCACAAACAACTAAATTGTG
• Tissue: pods
• Gene name: LI_gene_152784;
• Additional information: details;

Expression of Ll_transcript_476362

FPKM

• PAB: 2.5
• PNAB: 11.9
• PS1: 7.5
• PS2: 5.4
• PS3: 7.7
• PW1: 5.5
• PW2: 4.3
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476362

• Blastp: Pentatricopeptide repeat-containing protein At1g55890, mitochondrial from Arabidopsis with 51.46% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g55890, mitochondrial from Arabidopsis with 52.53% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G55890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445622.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;