Ll_transcript_477317

• Id Trinity: TRINITY_DN47461_c0_g4_i1
• Name Transcript: Ll_transcript_477317
• Sequence: AAAAATTGTAAATTTGGAAAGGAATATAAAAAGAAAGATAAAAAATGAAGAAGAAGCAAATTGAGAAAGAAGGAAAAGAAGAGAGAGTAGGGTGAAAATT GGTGAAAGTTGAAAGGAGGCAAGTTTTGTTGTTGGTGATTGAATGAGTTATTGATGGGTTGGTGTTGTTATGTATGTTTATAGTGTAGTTAGTACAAGAG GAGAAGAGCAGAAAGAGCAGTGATGAAATCACAGAGATCCTTTAACACCTCCATTCTGACCAAACACTGCCATCATCATCAAGGGGCTCCTCTCCCTTCT ATAGGTCCAGAATGAATTCCTCTTCCCTATAATAATAGAGAGAGAGAGATAGCCTTAAATTTATTAACTCTCTTTCTTTTCTCTGCCTCATATTGTGTCT GTTTCTCTGTGTGTTGAGATATGGAAATTTTGCTGGAAATCTTACTAGAGGACACCTCTTCCAGTTGGGTGGTTCCCTAAGCCTTGTTTGGCCAAGTGGG TATTAACCAAACAACCCAATTCTAATTCCATTTAGTTTGGTTAGCGCATAAAAGAGCTCAATTAGTATTAAAAAGGCAAAAAGTGGTGTGAAGAGAGAGA ATGTGTGTGTAAGTGAGAAAATAGTGAAGTAGAGAGAAAAAGAAAGAGATGGGTTAGGCTGAAAAGAGAGTAGGTATAACAACAACATTGTTGGTCTAGT TTAGTTTTCATGAGTTAGGGGATTGTTTTTGTGTGGTGATGGAACTTGGAAAATTGAATGGCAGGAACAAGTTTTGGGAGAAGCAAAAACAAGTATCAGA ATTGTGGCAGAAAGAGCAGGAACTACAAGAACAAGAAGAGAGTAAAAGTGGGAAGAAGCAAAGTAGGTTGGAGTTTAAAGAAACAAAAACAACAAGCCAG TAAGAGAAAGCATTCATTAAAAGCTGGAAGAGGAAACTCACAACAAGGGTCTGAGTCTGGATCCTCAGAGGAATCATCATCATCGTCAGCAACAACATCA GCATCAGCATCATCCACATCATCAAAACCCCCTCCAGGTTCTAAATTCAAGGCACCATGTAGAACAACACGAACTAGACCCAGATTCCTCTCCCCAAAAC CAAAACCAAGACTCAACCTTTCAACTCCAATTCCAATATCTTCAACAACCCCTTCAAAACAACCACCAACAACAACAATCCTATGTAGATTTCAACACAG ACTTGCAATCCCCACTTCCAAAAAAACGATCTTTTCAACTTCCACCGCCCCACCCTCTTCCTCTTTCATCATCATCACCTTCTATAATCGAATATGCAAG AAAAATGGGAGAACAACACCAAACACCAACAAGAGGGATGAGGAGAACTCCAACAGCAGGAGTTGGAGAAATTGTGGAAGTACAAGGTGGTCATATTGTA CGGTCCACCGGTCGAAAGGACCGTCACAGCAAAGTATGCACTGCCAAAGGACCAAGGGACAGACGGGTGCGCCTTTCGGCCCACACCGCCATCCAATTCT ACGACGTTCAGGACCGCCTCGGCTACGACCGCCCCAGCAAGGCGGTCGATTGGCTAATAAAAAAAGCCAAGGCCGCCATCGACCAACTAGCCGAGCTCCC TGCCTGGAACCCAACGGCCACAACAGAACAGCAGCAGCAACAACAACAGCAAATAAACGATATCCTCCGCCGCGAACCACAAGGGACGGAGGATGGACTA ATTGGTTCTAGTAGCCGCAGGGCGACTGCGGCTACTACAACCGTAGTGTCTAGTGGTGGAGGGATCTCAGAAGATTTTCAGCCACACCAATTTGGTGAAG AGAATAATAACAGAAACAAATATAACAGTGGTGGTTCTGGTTTTCTTCCACCGTCTATGGATACTGACATTGCGGATACGATTAAGTCCTTTTTTCCTAT GGTTGCTGCTGCGGAAACGACGACGGCGTCGTTTCATAATTATTCAACACCGCCGGATTTGTTGTCAAGAACTACAAGCGCTTCTGCAAATCACCACAAC CACCAGCAAGATCTACGGCTCTCGTTACAATCTTTTCAAGACCCTGTTCTGCTTCACCACCAACAACAACAACAGAATCAGACTCAGAATCAGCAAATGT TGTTCACCGGAACAAACACGCTTGGATTTGACGGTGGTGGTTCTTCTGGATGGTCGGAGCACCACCACCATGGTGAGGAACAAGAACATGACCATGGTCG GTTTCATAGAATGGTGGCTTGGAATGCTGCTGTTGCAGATGCTGCTAACAGTAGCCATGGCGGTGGATTTGTCTTTAACTCGCCGCCGCCGCCGTCGACG GTGGCGCCGGCGGCGATGTTTGGCCATCATGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACTCCTTCAATTCGTGCATGGATAGACC CTAATTCCTTTGCTGCAGCGGCAACTGTCGCTGCAGCCTCTCATCCCCATTATCACCATCACTACCTATCGCCGGCGATCCATCAGGCTTCTGTCTCTGG ATTCGCTTCACCTTCCAGTGGCTTCTCCGGCTTCCGCATTCCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTTTCAGACAAGCCGTCCTCTGCT TCCTCTGATTCTCGCCATTGATCGAAACACATCTAAAAAATCCAGACTTTCCTTTTCCTTCAGGTTCCCCTTCAAAATCCATTTCAAATTTCAGTTTGAT TTCTCTCTTTTTTAAAAGAAAAAAAATTCTAACTTGCAATTTTCCTTTTCATGTTCATGGGATGTCTTCAAATTATGATGTAATGGGTTTTCAGCAACAA GGGTATTTCATTCAACAGCAAGGTGGATTAGGTGTTGAGTTTGGATTTAAGATGCTGCTTCCTTTTCAATGGCCTAATATGCTGTGGGAATGAAGAAAAT CTGGGTTGAATTTTCAGGTTTTCCAATCCCATGGTTTGTTCTGCTTTTAATCTTATGTTCTATGTTTTTCAATCTTTGACTAGGACTACAAGTACTATGT CATATTGTGATGTTTGTTTCAGCTATGTTGACTGTCATCTTTTCCTATGTTACAATTTGTAGTAGTTCTGTCTCCTTTGTACTTCTATTTCTGGTTCCTC CAGTGATTTGGAAAAACATGAAGCACAAAATAACAATGCTACTAGTTTGTTTAATTTATCCTATATTTCCTACTTAGTGCAGACCCTTAAGCTGAATGAG GAGTTTTCTCCTTTACAAAACGGGGCAAAACCAAATAAGCCAACTTGAGAATTTTGCATCTGGGTGAAAGCATCTTATCTTGTTTATGTTTTTTGCTCAG GATGGTTGTTGCTGTCTTGTTTTAAATGAAGGAAAAGAGGATATGCCTTTTTTCCGGTTTGGAAATTCCAAATTCATCACCAAGTTATATCAAATAGATG AAAGAGGGTTGATTCTCTTTGAATAAGAATTGATTGTT
• Tissue: pods
• Gene name: LI_gene_152817;
• Additional information: details;

Expression of Ll_transcript_477317

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.4
• PS2: 1.1
• PS3: 0.3
• PW1: 0.3
• PW2: 0.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_477317

• Blastp: Transcription factor TCP4 from Arabidopsis with 47.88% of identity
• Blastx: Transcription factor TCP4 from Arabidopsis with 46.35% of identity
• Eggnog: Transcription factor(ENOG410YG88)
• Kegg: Link to kegg annotations (AT3G15030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453573.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;