Ll_transcript_474989

• Id Trinity: TRINITY_DN47477_c2_g2_i11
• Name Transcript: Ll_transcript_474989
• Sequence: CGAGAAATGACAAATGCCACTAGAGATAATTTTTTCACTTACAACATTTCAGGGGCCATTTCTTTAGTCCTTTTTAAAAAAAGTGTTTTTTAGAGACAAA AGCTTCTTAAAAAAAGCTGAAATTCAGCTTTTTTGTAGCTTCTGTTTTTTTTGTAAAAGCACAATCAAACAAATGTGCAAGTGTTAGAAGTTTTTTTTCT AATCAAAATAATCACTTTTAAAATCATGCACTTAGTGTATTAGAGTTTGAGATGTGTTTGTTATATTCAATTCCACTCTTCTATTAATGTGATATGATAT GATATAACTCAACAGGTATAGAGAAGGAAATTGGAGAATTACAACTTGAAGTATATCTCTTAATTAACTCTCTTGTTACACTTGAATAGTGATTTATCTA CTTTTGGTGTTGTATCTATCTATCATTATTGTATTATTATTAGGAAAAGAAGCTTGTTGCTGAGATCAAGAGAACTGCTAAAACGGGAAACGAGGGAATC GGTTCGCAAAAAACCATGAATTGATACGAGAGAACCAATTCGCTACCAAAATGAGAGAATTGTGTTTCAATAGGTAGTTGAGCTCAGATGAGAGGCATAA CAACTCACACCCAGGCAATGTATGCTCAGTCTTCTGTTGCTGTTGGCATGAAAGGTGCTAGTAAGGCAATGGCAGCTATGAATAAGCAAATGGCACCTGA AAAGCAAGCAAAAGTTATGCGGGATTTCCAGAAACAATCGGCACAAATGGATATGACTACCGAAATGATGTCAGATGCTATAGATGATGCCATAGATGAT GATGAAGCTGAAGAGGAAACTGACGAGCTCACAAATCAAGTCCTTGACGAAATTGGTGTGGATATTGCCTCACAGTTATCAACAGCTCCCAAAGGAAGAG TCACAACAAAGAACACTGAAAATGTTGGCAGCTCCGGCATTGATGATCTTGAGAAGCGTTTGGCGGCTCTTAGAAACCCATAATTTTTGCATGACACTAT GTGATTCCGGAACTCCCGAACTCGAAGTTGTGAACTAGAATTCCTTTTAGAACTATGTTCTCTTGGGATTTCAGAACACAACTCTGAACAGTATATATAC TTGGATACAATTTGTAAAGAGTTGCACTATTCCAACTACAGAATTTAATAACAATGTATCTTCTACTATTACAAAATTACTTTTTTCCCTCTAAACATTT CTTCATATACATTTCATTATTGCACATGGAATGGAATGTTAGATCATTTGAGAATAAGATTGATGCGCTAATGCTTAGAAATTTCAAGTGATCTTTATGT AAATGAGATAGATGTTTTTTTTATGTGGGAATGAAATGTTGCACACAAGTTAATTTCTCATGTAGACCTTTGTATTATCAGTACTTGCTTTTCCCGCATT ATCAATACATAACTGAATTGTCG
• Tissue: pods
• Gene name: LI_gene_152960;
• Additional information: details;

Expression of Ll_transcript_474989

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.2
• PS3: 0.7
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474989

• Blastp: Vacuolar protein sorting-associated protein 2 homolog 3 from Arabidopsis with 78.29% of identity
• Blastx: Vacuolar protein sorting-associated protein 2 homolog 3 from Arabidopsis with 58.3% of identity
• Eggnog: Charged multivesicular body protein(COG5491)
• Kegg: Link to kegg annotations (AT1G03950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444455.1)
• Pfam: Snf7 (PF03357.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;