Id Trinity | TRINITY_DN47480_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_476637 |
Sequence | AAAAAATGGTGGTGGTGTGAGAAAGGCTCTACTTAGATTATATGGTGATGGTGTTGAGATATTGTTCAATAGAGAAGAAGAGATTAGGATATTTGAATGT ATTTCAAAGCATGGTCAGGGACCACGCCTTCTTGCTCGTTTCACCTCTGGTCGAGTTGAGGAGTTTCTTCATGCTAGAGTATGTCATTTTCTTCTTCTTC TTTTCTGTTTCTTATTTATTCGAACTATTGGATTTCTAACGAATCGATTACTAGGATAAAAAGTAAGTCTTTTAAACTCACTATTCGAGTAACTTGATCA CTCCCTTTATTTATTTAATTTTTCTATCAATAAGTTATTGGTGTAGCAGCAAAAAGTATTGCATGTTTGATTCCATATACATTAACAACTTAACTCAAGA ATAGTGTTATATTATGGTTTTCTTAACATGATGACGAGAAATTAAAAATGGAGATAAAACATCAAAATTTTATTAAAAAGCTAAGAAGTAAAGCATTGAA GAAGCTATAATTTTTTTTATTTTATTCCTTTTTTATCCTCTTATCCTTACTCTTAATAAGAAAGTTGGCAATAACTAGAAGGGGCCAATTTGAGAACGTT TATAATAATGACCGGTGTCATAGAAAAAGTATATGTAAAAGTATTTTACATTATTATTTATTGTATCACTATTTATTTTCAATTATTGTTAATTGAAAAA AATGTAATTCAAATAAAAGATGAATAATACACTGGTAAATTTTTATATCATACATATTACAATCATGTCAGAAAGTACAAACTCTGTGTATGTTTATTTT TAGCCTTTAGTGCCAAAATCAGATTTGGTATTTGGTAAGACAAGTAAAGCGTTTGACTGTGCACAAAACATTTAGGAACTATAAGGTTAGCTCAATCGAA GTTTTAATAATTTATGTAAAAAAATTACATTATCACTGGGAAAGTTTGTCTTTATATAAAGTTATTGTCTATGTTTAATTTTTTTAATGATATGTGAATA TATGGAATGGATAGATAAAAAAGACCGTTTACGTCTGATTGTGATAAAATTAAGTTCATAAAAATGGCTACAATGATTATTGGAATTGAAGTTTGAGCTA GGGAGAATATATGCTCAATTTGAAAGTTAATTAGAATTTTCTTCTCTTAATTACTTTATTATTATATAGTCAAGGTATTTTCTTCATTCTTGATGCTCCC TTTTTCTTACTTTATTCCCTTCATACTTTGGAGCAATGGAGGGTTAACATTTCTTGTTAGTTATTTTTATTCTTTGGTCTTCTTGTTGTTTATAATTAAT TGATTAGGAAAAATCTTTAAGATATTCAACTGAATGGTGTTGAGTCATTGGAATAAGATCAGGTGCAAAGTGTTTCTTTTTAGCACCTTTTCCCAGTAAT GATATTTCTTCTGTTATTAATAAAGAAATTCAATGGTTTGAATTAATAAATAGATCTTAAACCATTAGATTTTCAAAAAAATGATAGCTAAGATAAAGAG TAATTCTTTTAGATCTAATATTCGAATAACTTGATCTCAACCCTAAAATAAATTGCATGAGTCCTAGAAAAGCAAAGATGATGAATTAGATAAACAATTT TATTTACATTCACATTATGATGATTTTTTTCTTGTCCATTGTAGACTCTATCAGCAGTTGACCTTCGTGACCCAGAAATATCTGCATTGATAGCTTCTAA GATGAGAGAGTTCCATAGACTTAACATGCCTGGTCCAAAAAAGGTTCAGCTGTGGCAGAGAATGAGGTAACTATAGATTATTAAGTCAATGTTAGAAACA TTTTTATTGATATGCAAAATATTAAATGCTCTCACAATGTTGTTTTACTAGGAATTGGCTTAGTGAATCAAAAACTATATGCTTCCCAAAGGATATAAAA AATTTCGGGTTGGAGAACCTAGATGAGGAAATAAATATGCTGGAGAAGTTGTTATCTGAAGGATATGAAGATATTGGCTTTTGTCACAATGACCTACAAT ATGGTAACATAATGATGGATGAAGAGACAAGATCAATAACTCTTATTGTAAGTGGTTTTTCTATAGTGTGGATTGTGGTTATATATTCTTTGCCTTGTGG TTGCATCTTTTTAATTTGTATGGCAAATGATACAGGACTATGAATATGCCAGTTACAATCCTCTTGCATATGACCTTGCAAATCATTTCTGTGAAATGGT GGCTGATTATCACAGTGACACACCTCACATTCTTGACTACACTAAATATCCTGAACTTGAGGAGCGTCAAAGGTTTATCCGTATCTATCTCACTTCTGAA GGCAAGAAACCCAGCAATGCTAGAGTGGAACAGTTAGTGAATGCTGCAGAGAAGTACACTCTTGCAAACCACCTATTTTGGGGCTTGTGGGGACTTATTT CTAGTTATGTCAATAAAATAGACTTCGACTACAAGGAGTATGCAAAGCAGAGATTTCAACAGTACTGGATAAGGAAGCCTACTTTATTGAACTCACCAAG CATAGTTTCCCAAGATGATGAAATTGTGAATGATTCTCTGCCATCCTTCAAGTGATTGCTGCTGGTCATGTCTTAGTGAAGTTCAGCTTAGTATATGTAT TTCTAATTTATAATAACGTCTAAATGTGTGCATGATGATATGCAGCATCAATCATGTTTGTAAATAATATAATCATCAACAATGTGTGATGAGATTTTGG CAAGTTTTTCTAAAACTTGCTTATCAACCTCTCTCTTGCAGCCATTTGACTAAACTTGCCTATCATATAGCATTCTCTTACATTTTCTCCCTCTTCATCA GTCTCAAACTAATGGTTAATCAGCATATGATATAGTAGTTTAAAAGGAAAGGCTGGAAGAAAAGAAAAGAAAAGAAATGATGTTCCAGAATAAAAACCAT TTTGGAAAAAATTCACTGAGATGATTTGTATCTAATACCTTTGTTTATAACTTTTACTGTTTTCTGACTGCACCCTCTCCACCAACTTGACTCATA BLAST |
Tissue | pods |
Gene name | LI_gene_152982; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476637
Blastp | Probable choline kinase 3 from Arabidopsis with 71.07% of identity |
---|---|
Blastx | Probable choline kinase 2 from Arabidopsis with 65% of identity |
Eggnog | Ethanolamine kinase(COG0510) |
Kegg | Link to kegg annotations (AT4G09760) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427266.1) |
Pfam | Choline/ethanolamine kinase (PF01633.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |