| Id Trinity | TRINITY_DN47482_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_475513 |
| Sequence | CATTATTGAAAGGGAAAAAGGTTGCTTCCATTAGGATCTGTTTGTCAGATTCGACGAAATTTTTCAATTCCCAATACTCATCGCACTTTCTTCTTCCCTA ACCTTCAATCATTCTTCTTCTTCTTCTTCTTCCCTAATCTGTAATCATCAGAATCTTCAATCCATCGTTGATCATAACACCATGTCGTCTATGTTGCATA GAAGTTTCAAGCCCGTTAAGTGTAAAACTGCTTTGAAGCTTGCGGTATCACGCATGAAGATATTTAAGAATAAGAAAGAAGGCGAAGTGAGGAAGCTCAG GAAGGAATTGGCTCAACTTCTTCAATCTGGCCAGGAATTAACTGCTAGAATAAGGGTTGAACATGTTATCAGGGAAGAGAAGCTAATGGCTGCATATGAT CTTGTTGAGATATATTGTGAACTTATAGTAGCACGCTTACCGATAATTGAATCACAGAAGTTATCTTTTCTTGTTTCCCCTTTTCAGAAACTGCCCCATT GATTTGAAGGAAGCAATTTCAAGTGTGATATTTGCATCCCCAAGATTGTCAGACATACCTGAGCTCGTGGATGTGCGGAAGCAAATTACATCTAAGTATG GAAAAGAATTTGTCTCGGCTGCTATTGAATTACGTCCTGACTGTGGTGTAAATCGCTTGTTGGTTGAGAAATTGTCTGCCAAAGCACCCGATGGTCCAAC CAAGATGAAAATACTGACTGCTGTTGCTGAGGAGAATAATATCAAATGGGAACCCAATCCATTTGGTGAAAATGATGGAAAGTCTTCTGAAGACTTATTG GTTGGACCAAATAATTTTGAGAATGCTTCTTATGTGGAACCTTCTCAAGTCCATGTTTTACCTGTTCATGATGAAAAGGCCCCTCCCAACTTACGCGTTT CCTCACAAACTAAACCAACGCATGATACATCTACAAATTCATATGAATATAATGCAAGTGGTGCTGCTAGAAAGGTGGGTGGCAATCAGTCAACATCAGA GATGTCTAGTCCACAAATTAGACCTTCAGGAACTGGAAGTCAAGAAAAAGATTTTCGAGATTCAAATTCTGAAAACAGGAGTGCCTTTTCTATGGGTAAG CAAAATTGGAACATGGAATTCAAAGATGCTGCCTCTGCTGCACAGGCTGCTGCAGAATCTGCAGAACATGCTAGCATGGCTGCTAGAGCAGCTGCTGAAC TTTCAAACCGTGAATACATGACAAGGCAGTATTCAAGTGGATCACATAGTTCCCATGTCAGCAAGTTTGGAGAAGCACCTCAAGAATATGATTTTCATGG CGACAAACATATTTCTACAGGTTCTGTTAACAACAACACCTTTCAAAGAAGGGATTCTGGGGCACGCAATGAACAGATTACTGCAAGAGAACATGATAAT CCAGTAGGAGCTCCCAGTGAACATTACAGGACTAGTCATGAGAACACGGTGAAACTTGCTCCATCAGCTTCATTGTCATCTAGTGGTGACAAACATATTT CTACAGGCTCTGTTAACAACACCTTTCATAGAAGGGATTCTGGGGCACACAATGAACAGATTACTGCAAGAGAACAAGATAATCCAGTAGGAGCGCCCAG TGAATATTACAGGACTAGTCATGAGAACATGGTGAAACGTGCTCCATCAGCTTCATTGTCATCTAGTGGTGACGAACATATTTCTACAGGCTATGTTAAC AACAACAGCTTTCATAGAAGGGATTCTGGGGCACGTAATGAACATATTACTGCAAGAGAACAAGATGATCCAGTAGGAGCGCCCAGTGAATATTACAGGA CTAATCATGAGAACACGGTGAAACGTGCTCCATCAGCTTCATTGTCATCTAGTGGTTCTTTTGGTGATAACCCATTTGCCCATGGTTCTCAAATGGCTGA TACATATCAGCATAATGACTCATTTGAGCAAGAGAATAGTGACTTACATAAAATGGATATAAAGAAGGAGGCAAGCAGCACTGGGGTAAATTTTATGACT GGGCTACACAGTGATGATGATTTGAATACTGAAAATAGTTATCACATTAGAGATGCAACACCGTTTACACAATCCAGAAAAGCTTCCTCTTCTCACCTCA TTTCTACAAGTTATGATCATAATCAGAATTTGAACTCATATGACCAGGAGATGGGGAACAAGGCTGTGGAAGACATTTTTGATACCATTGAAAGAAACAC TCAGACAATCACTATGGAAGCAAATTCTTATAATGATACATCCGTAGCGTTTGATGATTCTGGATCAGAGGATGATAATTATAAATTTGATTTTGAGAAC AAATACAAGGGAGAGAGATCTAGTTTGTTCTTCTCATCTCCTGGAAGCAAATCACAAGTTGATCCATTAGAAAATACAAGTTCTTGGAGACATCGACAAT ACATTGATGAGAGGGAGTCAAGTTCTATTGCACAGTCACATTCTTCTGTTGTTTCTGAAAAATTGACAATATCTGCAATTTCTTCAGAGAAAGAAGATTT GGAGCCTGTCAATTTTGATGATTCAGAAGATGCGGTTTCAGATAGTGAGCTTAATTTGGTCAACTCTTTGGTTTCTGGGACTTCTGATTATAGAATTTCT GCCATTGATCAGAGTGAAAACCATGAGGCTTTAGAGTCCTCAGCAAGAAATGCTAAAAATGTGGGCTCTGACAGAAAGACTTGGGTATCACCATCTTCAG TTGGGTCTGATTCTGTGGAAGAACAATTTGAGAAAAAGGTAGAGATTAATACTATGTCGGATAAGACTTTTGGTTTTGGTGAATTACGAATTAAACAGTC ATCACAACTGCCTGATACTATCAAATATACGGAAACTTTGGAGGAGTCCCATACAGAAAATGATATGGGGTTAAACTATGGAATGTTGAAGGGTGGTTTC CGCAATAAAGCTCATAAGAGACCACCTTATATTAAGAATACATCAAATGAGAATTCATCTTCATTGAGTGACATTTCAGTCCAAAATGAAAGCTCTTTTC CTACTGTAAGGACTTCAATCAGCTCTGATGCTCCTGTTCAGGACAAATACATGAGGGAAGTAAGTACAGGAAATAGAAGTGTGGGCTTGAGAAACACACC TTCTGATTTTGATAGTCATGATGCTGTTTCAAACTCACAAGTGAAACCGACTAGTACTCATGACCCTCGCATGCAGAAAGAGCAGAGTGAAGCCAAAAAG AAATCAAGCTCAAGGGCCTCAAGTACATACTTCGATTCTGATATTAATAATTCTGAGGATGAAACTCCTAAACTAAGTTCAGCGAGTCTCACTCATCCTG TTAGTGGAATGTCTCGAAGGAAGTCAACTCCTTCAAAATCCGGTACAGGTTTAAATTTGGACAATGCTCCTTCATACAAGGCTTCTGTGACTTCTGGTAC AAGACTTGGATGGAACTCTTCAAGGGTTTCTCATGAGAGTGATAATCAAAAGGCCTCATACATGATGAAAAGCTCTGAAAATTTGGGAAGTACTCAGCCT GGATCAGCTGAACATGCAGCATCTATACCAATTTCAGAGCCCAATAGGTCCCCTCATGAGAAAATTATAAAATCATCGGCAAGGGTGCAACCATCCAGTT CTTTTCCTAAAGCAGCAATACCGGATAGCGAAGAGGGCAAAGAGGCTTCAAAATCTTTAAGTTCTGATGGAGATACTACTCCTTCAAAGCAGAAGGTTGC TCATGTTCATCCAAAGCTACCTGACTGTGATTTCATCACTGCCCACTTCCTGTCTCTGAAGAAGGATCGTCAATAAATTGCATTTGATTGCATATTATCA ACTTAGCTACTCATACTTGGTCTTATTTTTTATCACTTTTTCACAGCTTCTATAGTTACATACAAGTGCTACATCTATTTTTCTTGTAAAAATTGAGTCA GTAAAGGTTTAACTATATCTTTTTTTTTGGTACAACTCTATTTCTTACTACTACAGATTGAGCAGGGTATGTTGAAAAGATTCTTGTAATCAAACTAAAT AATGTTCTACTAAGTTTGTGCTTGAAAATCAATATTGTGCAATGCTGTCCCTTTGGGCTTTTATATATTTCGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_153003; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475513
| Blastp | - |
|---|---|
| Blastx | IST1-like protein from Dictyostelium with 45.24% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447985.1) |
| Pfam | - |
| Rfam | - |
| GO | - |