Ll_transcript_475515

• Id Trinity: TRINITY_DN47482_c5_g1_i4
• Name Transcript: Ll_transcript_475515
• Sequence: CATTATTGAAAGGGAAAAAGGTTGCTTCCATTAGGATCTGTTTGTCAGATTCGACGAAATTTTTCAATTCCCAATACTCATCGCACTTTCTTCTTCCCTA ACCTTCAATCATTCTTCTTCTTCTTCTTCTTCCCTAATCTGTAATCATCAGAATCTTCAATCCATCGTTGATCATAACACCATGTCGTCTATGTTGCATA GAAGTTTCAAGCCCGTTAAGTGTAAAACTGCTTTGAAGCTTGCGGTATCACGCATGAAGATATTTAAGAATAAGAAAGAAGGCGAAGTGAGGAAGCTCAG GAAGGAATTGGCTCAACTTCTTCAATCTGGCCAGGAATTAACTGCTAGAATAAGGGTTGAACATGTTATCAGGGAAGAGAAGCTAATGGCTGCATATGAT CTTGTTGAGATATATTGTGAACTTATAGTAGCACGCTTACCGATAATTGAATCACAGAAAAACTGCCCCATTGATTTGAAGGAAGCAATTTCAAGTGTGA TATTTGCATCCCCAAGATTGTCAGACATACCTGAGCTCGTGGATGTGCGGAAGCAAATTACATCTAAGTATGGAAAAGAATTTGTCTCGGCTGCTATTGA ATTACGTCCTGACTGTGGTGTAAATCGCTTGTTGGTTGAGAAATTGTCTGCCAAAGCACCCGATGGTCCAACCAAGATGAAAATACTGACTGCTGTTGCT GAGGAGAATAATATCAAATGGGAACCCAATCCATTTGGTGAAAATGATGGAAAGTCTTCTGAAGACTTATTGGTTGGACCAAATAATTTTGAGAATGCTT CTTATGTGGAACCTTCTCAAGTCCATGTTTTACCTGTTCATGATGAAAAGGCCCCTCCCAACTTACGCGTTTCCTCACAAACTAAACCAACGCATGATAC ATCTACAAATTCATATGAATATAATGCAAGTGGTGCTGCTAGAAAGGTGGGTGGCAATCAGTCAACATCAGAGATGTCTAGTCCACAAATTAGACCTTCA GGAACTGGAAGTCAAGAAAAAGATTTTCGAGATTCAAATTCTGAAAACAGGAGTGCCTTTTCTATGGGTAAGCAAAATTGGAACATGGAATTCAAAGATG CTGCCTCTGCTGCACAGGCTGCTGCAGAATCTGCAGAACATGCTAGCATGGCTGCTAGAGCAGCTGCTGAACTTTCAAACCGTGAATACATGACAAGGCA GTATTCAAGTGGATCACATAGTTCCCATGTCAGCAAGTTTGGAGAAGCACCTCAAGAATATGATTTTCATGGCGACAAACATATTTCTACAGGTTCTGTT AACAACAACACCTTTCAAAGAAGGGATTCTGGGGCACGCAATGAACAGATTACTGCAAGAGAACATGATAATCCAGTAGGAGCTCCCAGTGAACATTACA GGACTAGTCATGAGAACACGGTGAAACTTGCTCCATCAGCTTCATTGTCATCTAGTGGTGACAAACATATTTCTACAGGCTCTGTTAACAACACCTTTCA TAGAAGGGATTCTGGGGCACACAATGAACAGATTACTGCAAGAGAACAAGATAATCCAGTAGGAGCGCCCAGTGAATATTACAGGACTAGTCATGAGAAC ATGGTGAAACGTGCTCCATCAGCTTCATTGTCATCTAGTGGTGACGAACATATTTCTACAGGCTATGTTAACAACAACAGCTTTCATAGAAGGGATTCTG GGGCACGTAATGAACATATTACTGCAAGAGAACAAGATGATCCAGTAGGAGCGCCCAGTGAATATTACAGGACTAATCATGAGAACACGGTGAAACGTGC TCCATCAGCTTCATTGTCATCTAGTGGTTCTTTTGGTGATAACCCATTTGCCCATGGTTCTCAAATGGCTGATACATATCAGCATAATGACTCATTTGAG CAAGAGAATAGTGACTTACATAAAATGGATATAAAGAAGGAGGCAAGCAGCACTGGGGTAAATTTTATGACTGGGCTACACAGTGATGATGATTTGAATA CTGAAAATAGTTATCACATTAGAGATGCAACACCGTTTACACAATCCAGAAAAGCTTCCTCTTCTCACCTCATTTCTACAAGTTATGATCATAATCAGAA TTTGAACTCATATGACCAGGAGATGGGGAACAAGGCTGTGGAAGACATTTTTGATACCATTGAAAGAAACACTCAGACAATCACTATGGAAGCAAATTCT TATAATGATACATCCGTAGCGTTTGATGATTCTGGATCAGAGGATGATAATTATAAATTTGATTTTGAGAACAAATACAAGGGAGAGAGATCTAGTTTGT TCTTCTCATCTCCTGGAAGCAAATCACAAGTTGATCCATTAGAAAATACAAGTTCTTGGAGACATCGACAATACATTGATGAGAGGGAGTCAAGTTCTAT TGCACAGTCACATTCTTCTGTTGTTTCTGAAAAATTGACAATATCTGCAATTTCTTCAGAGAAAGAAGATTTGGAGCCTGTCAATTTTGATGATTCAGAA GATGCGGTTTCAGATAGTGAGCTTAATTTGGTCAACTCTTTGGTTTCTGGGACTTCTGATTATAGAATTTCTGCCATTGATCAGAGTGAAAACCATGAGG CTTTAGAGTCCTCAGCAAGAAATGCTAAAAATGTGGGCTCTGACAGAAAGACTTGGGTATCACCATCTTCAGTTGGGTCTGATTCTGTGGAAGAACAATT TGAGAAAAAGGTAGAGATTAATACTATGTCGGATAAGACTTTTGGTTTTGGTGAATTACGAATTAAACAGTCATCACAACTGCCTGATACTATCAAATAT ACGGAAACTTTGGAGGAGTCCCATACAGAAAATGATATGGGGTTAAACTATGGAATGTTGAAGGGTGGTTTCCGCAATAAAGCTCATAAGAGACCACCTT ATATTAAGAATACATCAAATGAGAATTCATCTTCATTGAGTGACATTTCAGTCCAAAATGAAAGCTCTTTTCCTACTGTAAGGACTTCAATCAGCTCTGA TGCTCCTGTTCAGGACAAATACATGAGGGAAGTAAGTACAGGAAATAGAAGTGTGGGCTTGAGAAACACACCTTCTGATTTTGATAGTCATGATGCTGTT TCAAACTCACAAGTGAAACCGACTAGTACTCATGACCCTCGCATGCAGAAAGAGCAGAGTGAAGCCAAAAAGAAATCAAGCTCAAGGGCCTCAAGTACAT ACTTCGATTCTGATATTAATAATTCTGAGGATGAAACTCCTAAACTAAGTTCAGCGAGTCTCACTCATCCTGTTAGTGGAATGTCTCGAAGGAAGTCAAC TCCTTCAAAATCCGGTACAGGTTTAAATTTGGACAATGCTCCTTCATACAAGGCTTCTGTGACTTCTGGTACAAGACTTGGATGGAACTCTTCAAGGGTT TCTCATGAGAGTGATAATCAAAAGGCCTCATACATGATGAAAAGCTCTGAAAATTTGGGAAGTACTCAGCCTGGATCAGCTGAACATGCAGCATCTATAC CAATTTCAGAGCCCAATAGGTCCCCTCATGAGAAAATTATAAAATCATCGGCAAGGGTGCAACCATCCAGTTCTTTTCCTAAAGCAGCAATACCGGATAG CGAAGAGGGCAAAGAGGCTTCAAAATCTTTAAGTTCTGATGGAGATACTACTCCTTCAAAGCAGAAGGTTGCTCATGTTCATCCAAAGCTACCTGACTGT GATTTCATCACTGCCCACTTCCTGTCTCTGAAGAAGGATCGTCAATAAATTGCATTTGATTGCATATTATCAACTTAGCTACTCATACTTGGTCTTATTT TTTATCACTTTTTCACAGCTTCTATAGTTACATACAAGTGCTACATCTATTTTTCTTGTAAAAATTGAGTCAGTAAAGGTTTAACTATATCTTTTTTTTT GGTACAACTCTATTTCTTACTACTACAGATTGAGCAGGGTATGTTGAAAAGATTCTTGTAATCAAACTAAATAATGTTCTACTAAGTTTGTGCTTGAAAA TCAATATTGTGCAATGCTGTCCCTTTGGGCTTTTATATATTTCGAT
• Tissue: pods
• Gene name: LI_gene_153003;
• Additional information: details;

Expression of Ll_transcript_475515

FPKM

• PAB: 5
• PNAB: 4.3
• PS1: 5.8
• PS2: 4.6
• PS3: 5.8
• PW1: 3.6
• PW2: 7.1
• PW3: 8.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475515

• Blastp: IST1-like protein from Dictyostelium with 38.95% of identity
• Blastx: IST1-like protein from Dictyostelium with 38.42% of identity
• Eggnog: positive regulation of collateral sprouting(ENOG410YG52)
• Kegg: Link to kegg annotations (DDB_G0289029)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447985.1)
• Pfam: Regulator of Vps4 activity in the MVB pathway (PF03398.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;