Ll_transcript_475892

• Id Trinity: TRINITY_DN47485_c0_g3_i3
• Name Transcript: Ll_transcript_475892
• Sequence: CTCATTCTAATTTTTTTAAATTCTCCTAAATTTCCTTCATTTGATTTCCATTTCAATTTAGAAGAGAACACTACTCTCTCTTTCTCTCAAAACACCGTTT TTTCCCTCTCTTCAATCGATGATGAAAATTGAAACTGATTTCTCTTTCGTTTCTTCATAGCCTTAGCCATTTCTCATTAAGATCCATTGGAGCATTTTTT TTAATTTTTTAATTTTTAATTCTTATTATCGGATTTGAACGCTGATCTTCAATTAATCCACTCGTAATTGCTAATTGAAGCATGTGCAGTGGTCCAGAGA AATCAAAATCACCATCTTCATCTGCCGCAGAAGGTTCAACTAACTTTGAAGACATGAAAAATCTAACTGTTCATACTGAAGATTCCTTTTCCAGCTTACT TGAGCTTGCTTCTAACAATGATTTTGAAGATTTTAAGCTAGTCTTAGATAAGGATGCTTCTCTCGTTAATGAAGTTGGCCTATGGTATGTTCGTCAAAAT GGCTCTAAACAAGTTGTTCTTGAGCATAGAACTCCTTTAATGGTTGCTGCTACCTATGGGAGCATGGATGTTGTAAAGCTTATACTCTCGTACCCAGAAG CTGATGTAAACTTCTCTTGCGGAGCAGATAAAAGCACTGCTCTTCATTGTGCTGCTTCAGGTGGGTCTGTTCATGCAGTTGGAGTTGTGAAACTTCTTAT ATCAGCTGGTGCTGATATCCGTTGTGTAGATGCTAATGGAAACCATCCTATAGATGTTATAGTCGTTCCTTTTAAGCTTCAAGGCGTGAAATCAATTCTT GTTGAGCTTCTTTCAGATAGTGCATCTGATGGGTCTGTTGATGACTGCTTTATCCCACCTTCTGTTGGTTCATCAAGTCCTGTTTCAACTGCTCATTTAT CATCACTTGAATATGGGTTGCCATCCTCTCCTTCAGGCTCACCACCTTCTCCTGTGGCCACAAAGTTTATTGATACACCTGAGAAGAAGGAATATCCAAC TGACCCATCACTCCCTGATATAAAAGACAGCATATATACAACAGATGAGTTTCGAATCTTCTCATTCAAGGTCCGTCCTTGTTCCCGTGCATACTCCCAT GATTGGACTGAGTGCCCTTTTGTTCATCCTGGAGAGAATGCTCGCAGGAGAGACCCCAGAAAGTTCCATTACAGCTGTGTTCCATGCCCTGATTTTAGAA AAGGGGCTTGTAGACGTGGAGATATGTGTGAATATGCTCATGGTGTATTTGAAAGCTGGCTGCACCCAGCCCAGTATCGGACAAGGCTCTGCAAAGATGG TACTAGTTGCAATAGAAGGGTTTGTTTTTTCGCTCACGCAATAGAAGAGCTGCGTTCACTGTACGGATCCACAGGTTCAGCTGGCCATTCTCCTCGCTCA CCTGCTTCTGCTCCTAATGTCATGGACATGGCTGCTGCAATGAGCCTTTTTCCTGGTTCGCCCTCATCTATGTCTTCCATGTCTCCATCCCCCTTTGCTC AGCCTATGTTTCCATCTCCAAATGGCATCTCTAATTCGTCTGCTGGTGGTTGGCCCCAGCCAAATGTGCCAGCTCTTCATTTACCAGGAAGCAATCTTCA ATCTAGTCGCTTGAGATCTTCTTTTAATGCCCGTGACATGCCACGAGAAAACTTGAATATGTTGCCAGATTTTGATGGGCAGCAGCACCTTTTCAATGAC TTGAGCTGTTTCTCTCAGCATCATCCTGGTGTTGGTTCAATGAGTCGACCCGGTCGGGCTAAGACACTAACCCCATCTAATCTTGATGAGCTTTTCTGTT CTGATATTTCTTCATCTCCTCGATATTCTGACCCAGCAGCGGCCTCTGTATTTTCTCCTACACACAAATCAGCTGTATTCAATCACTTTCAACAGCTTCA AAGTACATTAGCACCCATAAATACAAATCATTTGTCACCTAAAAATGTTGAGCATCATCTATCACAAGCATCATTTGGTGTCTCTTCTCCTGGAAGGATG TCACCAAGAAGTATGGAATCAATTTCCCCGATGAGCTCTCGTTATTCAGCATTTGCTCAGCGTGAGAAACCTCAGCAACAGCTGTGGAGCCCTGGCTCAA GGGACCTTGGTGTTAACACTTCTGCTTCAGTTGTTGGGTCCCCTGTAAACTCATGGTCCAAATGGGGATCTCCTAATGGAAAAGCAGATTGGTCAGTAAA TGGAAATGAGCTCGGTCCACCGTCTGGGCACGGAAATAATGGGGAGGGGCCTGATCTATCATGGGTTCAATCTCTTGTCAAGGAATCTCCACCTGAAATG ATAAAGGAGAACTTTGCAGGGTCTGGCCCTATGGCATCTGCTGCTGCGGGAATGAAAACCAATCCTCAAATTGAATCCATTGATCATTCTGTTATAGGTG CCTGGCTTGAGCAAGTGCAGCTGGATCAGTTTGTTGTCTAATTGACCCTTTACATGTTGTTGAGATAGGTATTTAATTTCATGTGGTACATATTCTTTTG GGAAAAAAATTAGGTCCTGTTAAGATACCAAAACAAGGAGTGATGGCTGCAAAGTTCCCAAAGGATATTCTGAATTTTTTGTTTTCATATTTGTCATTCA TTATTTTTACTTGATCGACATAATTGTTCATTATTTACTTCAGCTTCAAGGGGACTAAAGACTTGGATGTTGTTGTTTAGAGCCAAGGATGGCTCTGGAC CGATAATCTAGTAAAAAAAGAAAATCATTTTTATGTAAGGTATTTTTCTTCCAAAAAAATGGCCCTTTGCACTTATTTTATTTACCCCTTCCCCACCTAT CCCCCTTTAAAATGAAAGCTAGATGGTTTATATTGAACAAAATCCCATAGTTCTATGTCTTCAAATTTCTTTGTCATACAGTTTGCATTGTAAGATTCTG TCAGGTAATTTGCTGTTTGAATATTTACTGCTGCCTGGTCATAAGATTCTCTATGGATTTCTGTTCTGCTGTTATAAATGGTGCTGTACTGGTTAGTTTC AAATTCAAGGCATTGATTATTTCTTTCTGCAACTTTGGAATTACCTATCTCTCTTGATATTTTTCTTGTATACTTACACCTACTTGTACCAACACTGTTT TTAACATTTATTAATTCTTTGGCATAGACTGTACGGATTAGTATTAGACGAATCAGCATTTTTTATAACTAAATGAATTAGCATTTCATTGGCACACACT TTATAGTAATTTATGTAACTGAATCTATTTTGGTATGACACTTAATAAATGGATTTGTTTCTTTTTCAAATTAAAATAATCTTATTTGCAGCATATAAGC CCTTTTTATCTTACTGGTCAAAATAGGGGTACCTATATAATGTTAATGGTTTAGCCAATATTAAAATATAGATAATAAATTCATAAATATTATTATTTAC ATTATATAACTTAATTAT
• Tissue: pods
• Gene name: LI_gene_153038;
• Additional information: details;

Expression of Ll_transcript_475892

FPKM

• PAB: 10.2
• PNAB: 15
• PS1: 11.7
• PS2: 6.2
• PS3: 9.4
• PW1: 13.4
• PW2: 20.4
• PW3: 25.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475892

• Blastp: Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 56.99% of identity
• Blastx: Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 55.45% of identity
• Eggnog: nucleic acid binding transcription factor activity(ENOG410Y7IC)
• Kegg: Link to kegg annotations (AT2G41900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443633.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;